RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 OPRL1P41146 370 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 RGRP47804 291 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 NIPAL4Q0D2K0 466 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 KCNJ11Q14654 390 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FAM214AQ32MH5 1076 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 NEK5Q6P3R8 708 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ALKAL1Q6UXT8 129 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF276Q8N554 614 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 CNTD1Q8N815 330 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 LEMD2Q8NC56 503 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 OR4E2Q8NGC2 313 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 DNAJB14Q8TBM8 379 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 BBS4Q96RK4 519 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 RPP25Q9BUL9 199 aaKnown RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 GATA5Q9BWX5 397 aaPredicted RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 EQTNQ9NQ60 294 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 MTMR10Q9NXD2 777 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 EIF2B4Q9UI10 523 aaKnown RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 CLEC4EQ9ULY5 219 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 RHPN2P1A8MT19 583 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 CLPXO76031 633 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 PRKCHP24723 683 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 CDKN1CP49918 316 aaPredicted RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 CLCN5P51795 746 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 MEF2AQ02078 507 aaPredicted RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 MERTKQ12866 999 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 PKDCCQ504Y2 493 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FAAH2Q6GMR7 532 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FAM45BPQ6NSW5 357 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 SYT12Q8IV01 421 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 OR8H2Q8N162 312 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 OR56A4Q8NGH8 313 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FAM45AQ8TCE6 357 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 LMX1AQ8TE12 382 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FIG4Q92562 907 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 HDAC2Q92769 488 aaKnown RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 NUS1Q96E22 293 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 PRRG3Q9BZD7 231 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 IRF2BPLQ9H1B7 796 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 TP63Q9H3D4 680 aaPredicted RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 CACNA1BQ00975 2339 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 DHRS12A0PJE2 317 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 SOCS2O14508 198 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 RGS5O15539 181 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FYNP06241 537 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 HNRNPA1P09651 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 FGF3P11487 239 aaPredicted RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 HGFP14210 728 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 HNF1BP35680 557 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ATP6V1E1P36543 226 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ARSDP51689 593 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 PRKCQQ04759 706 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 NFATC3Q12968 1075 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 PGM2L1Q6PCE3 622 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 VASH1Q7L8A9 365 aaPredicted RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 AMZ2Q86W34 360 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 NKAPQ8N5F7 415 aaKnown RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 RBM38Q9H0Z9 239 aaKnown RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 TMEM245Q9H330 911 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 PNPLA8Q9NP80 782 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 EXD2Q9NVH0 621 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ERGIC3Q9Y282 383 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 SLC27A6Q9Y2P4 619 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 YBX2Q9Y2T7 364 aaKnown RBP10.6□□□□□ -0.71
FAM3A-221ENST00000612856 STON1Q9Y6Q2 735 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ZW10O43264 779 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 LAMTOR5O43504 91 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 PRAMEF11O60813 436 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 SEMA3DO95025 777 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 POU1F1P28069 291 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF776Q68DI1 518 aaPredicted RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 METTL27Q8N6F8 245 aaPredicted RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 TERB1Q8NA31 727 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 HM13Q8TCT9 377 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 ARMC5Q96C12 935 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 FCRL5Q96RD9 977 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 ASPSCR1Q9BZE9 553 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 DZANK1Q9NVP4 752 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 SMOXQ9NWM0 555 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 CNOT6Q9ULM6 557 aaKnown RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 SPO11Q9Y5K1 396 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 TEX264Q9Y6I9 313 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 SBF1O95248 1867 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 UPK3BL1B0FP48 263 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 UPK3BL2E5RIL1 263 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 AHSGP02765 367 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 ELK4P28324 431 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 AQP1P29972 269 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 GALNT2Q10471 571 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 MAPRE2Q15555 327 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 BROXQ5VW32 411 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 CES4AQ5XG92 561 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 PCYOX1LQ8NBM8 494 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 HEXDCQ8WVB3 486 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 OSCP1Q8WVF1 389 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 DACT3Q96B18 629 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms