RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 MTRF1LQ9UGC7 380 aaKnown RBP6.94□□□□□ -1.3
CBWD1-219ENST00000611457 BLOC1S6Q9UL45 172 aa6.94□□□□□ -1.3
CBWD1-219ENST00000611457 CCDC162PA2VCL2 907 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PRMT5O14744 637 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ACPPP15309 386 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TYK2P29597 1187 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PEBP1P30086 187 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 MC4RP32245 332 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 VHLP40337 213 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 EPHB1P54762 984 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ARSFP54793 590 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GABREP78334 506 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 KPNB1Q14974 876 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 LPAL2Q16609 132 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PPP1R3AQ16821 1122 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SPESP1Q6UW49 350 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 OR4K2Q8NGD2 314 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SNX19Q92543 992 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 METTL2AQ96IZ6 378 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 EXOC2Q96KP1 924 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 WDR83Q9BRX9 315 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 DPH5Q9H2P9 285 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 CYP4F12Q9HCS2 524 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FSCN3Q9NQT6 498 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 EURLQ9NYK6 297 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ADGRE2Q9UHX3 823 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PACSIN2Q9UNF0 486 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SMIM23A6NLE4 172 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TCP11X1B4DZS4 312 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PFDN1O60925 122 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 C1orf105O95561 183 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 EML2O95834 649 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GUSBP08236 651 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PTDSS1P48651 473 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ADPRMQ3LIE5 342 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ANKRD20A4Q4UJ75 823 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 C1QTNF12Q5T7M4 302 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 B3GNTL1Q67FW5 361 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 JMJD6Q6NYC1 403 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FAM198BQ6UWH4 519 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PIM3Q86V86 326 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ENDOVQ8N8Q3 282 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RHEBL1Q8TAI7 183 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TSACCQ96A04 125 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TREX2Q9BQ50 279 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 C14orf105Q9NVL8 296 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GALNT8Q9NY28 637 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 CA5BQ9Y2D0 317 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 HEY1Q9Y5J3 304 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GMEB1Q9Y692 573 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 MUC3AQ02505 3323 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 H0YIG0 161 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 NEMP1O14524 444 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 DSCR3O14972 297 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TTI1O43156 1089 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RRP8O43159 456 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 POP7O75817 140 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SLC25A14O95258 325 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SHBGP04278 402 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 PIM1P11309 404 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 COL6A2P12110 1019 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GSTT1P30711 240 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SLC6A12P48065 614 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RAB28P51157 221 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 IGLV3-21P80748 117 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FAM53BQ14153 422 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SEMA3AQ14563 771 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ZIC1Q15915 447 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 GGTA1PQ4G0N0 100 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 DCAF12Q5T6F0 453 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 CPZQ66K79 652 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ANKS6Q68DC2 871 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FAM45BPQ6NSW5 357 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RFLNAQ6ZTI6 216 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RAB11FIP2Q7L804 512 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TDRPQ86YL5 185 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TRIM42Q8IWZ5 723 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RIBC1Q8N443 379 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RYBPQ8N488 228 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FITM2Q8N6M3 262 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 CCNYQ8ND76 341 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 OR6K2Q8NGY2 324 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FAM45AQ8TCE6 357 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 LRRC8CQ8TDW0 803 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 ASZ1Q8WWH4 475 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SNF8Q96H20 258 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 TMEM237Q96Q45 408 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 CCDC28BQ9BUN5 200 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 IQCGQ9H095 443 aaKnown RBP6.93□□□□□ -1.3
CBWD1-219ENST00000611457 RHBGQ9H310 441 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 FGFR1OP2Q9NVK5 253 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 BFARQ9NZS9 450 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 SATB2Q9UPW6 733 aa6.93□□□□□ -1.3
CBWD1-219ENST00000611457 BPTFQ12830 3046 aa6.92□□□□□ -1.3
CBWD1-219ENST00000611457 A0A1B0GVG6 124 aa6.92□□□□□ -1.3
CBWD1-219ENST00000611457 RHPN2P1A8MT19 583 aa6.92□□□□□ -1.3
CBWD1-219ENST00000611457 CD3EAPO15446 510 aaKnown RBP6.92□□□□□ -1.3
CBWD1-219ENST00000611457 EFSO43281 561 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms