RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HOXC8P31273 242 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 BMXP51813 675 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 UBASH3AP57075 661 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 LINC01547P58512 204 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 B3GALT5-AS1P59052 145 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 C6orf136Q5SQH8 315 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 CYP4A22Q5TCH4 519 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 GFI1BQ5VTD9 330 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 CAVIN1Q6NZI2 390 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 PET117Q6UWS5 81 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 ABI3BPQ7Z7G0 1075 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 TRPT1Q86TN4 253 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 DCUN1D3Q8IWE4 304 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 ANKRD13CQ8N6S4 541 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 NKAIN3Q8N8D7 197 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 MAPKAPK5-AS1Q8N8E1 139 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 BMPERQ8N8U9 685 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 ZNF383Q8NA42 475 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 VANGL1Q8TAA9 524 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 PHLDA1Q8WV24 401 aaPredicted RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 FCAMRQ8WWV6 532 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 FAM20AQ96MK3 541 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 FNBP1Q96RU3 617 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 ADPGKQ9BRR6 497 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 GTPBP2Q9BX10 602 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 PANK2Q9BZ23 570 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 PRRG4Q9BZD6 226 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 FN3KQ9H479 309 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 ZWILCHQ9H900 591 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 XAB2Q9HCS7 855 aaKnown RBP3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 ADPRHL2Q9NX46 363 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 SNX7Q9UNH6 387 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 RIPK3Q9Y572 518 aa3.92□□□□□ -1.78
SMCHD1-213ENST00000609587 IGLV9-49A0A0B4J1Y8 123 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 TRAV34A0A0B4J273 112 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 A0A0G2JLW4 131 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 ENO4A6NNW6 628 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 SMIM1B2RUZ4 78 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 ATP6V0E1O15342 81 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 UMODP07911 640 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 PLA2G4BP0C869 781 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 CDH3P22223 829 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 SP100P23497 879 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 ACAT1P24752 427 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 CALRP27797 417 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 RBP5P82980 135 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 SCARB2Q14108 478 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 UGP2Q16851 508 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 HECTD3Q5T447 861 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 MOXD1Q6UVY6 613 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 ENPP7Q6UWV6 458 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 CEACAM20Q6UY09 585 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 MARK2Q7KZI7 788 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 SPATA21Q7Z572 469 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 DNAJB7Q7Z6W7 309 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 ANKRD23Q86SG2 305 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 RTN4RL2Q86UN3 420 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 MMD2Q8IY49 270 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 EID3Q8N140 333 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 RYBPQ8N488 228 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 OR10V1Q8NGI7 309 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 DEPDC1BQ8WUY9 529 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 FAM162AQ96A26 154 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 CITED2Q99967 270 aaPredicted RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 THUMPD3Q9BV44 507 aaKnown RBP3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 SLC2A11Q9BYW1 496 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 SDF2L1Q9HCN8 221 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 DNAJC4Q9NNZ3 241 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 FGF21Q9NSA1 209 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 MRGBPQ9NV56 204 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 TXNDC16Q9P2K2 825 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 WDR83OSQ9Y284 106 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 POMT1Q9Y6A1 747 aa3.91□□□□□ -1.78
SMCHD1-213ENST00000609587 A0A087WV48 116 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 A0A1W2PPK0 400 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM72CH0Y354 149 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 SLC22A2O15244 555 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 RPS6KA5O75582 802 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 IGKV3-20P01619 116 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 GBAP04062 536 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 HSP90AB1P08238 724 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FRMD6-AS1P0C7T7 363 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 VDRP11473 427 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 MYL6BP14649 208 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 CA6P23280 308 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 HOXC13P31276 330 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 CEACAM8P31997 349 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 TIMP3P35625 211 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 HSD17B3P37058 310 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 PRKCIP41743 596 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 CRKLP46109 303 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 ALDH3A2P51648 485 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 DLK1P80370 383 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 BFSP1Q12934 665 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 TAF10Q12962 218 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 GPR17Q13304 367 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 NPTX1Q15818 432 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 UGCGQ16739 394 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 PHKG1Q16816 387 aa3.9□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM72AQ5TYM5 149 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms