RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CPN2P22792 545 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 CSHL1Q14406 222 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ZNF169Q14929 603 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 VEPH1Q14D04 833 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 DUSP6Q16828 381 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 CERCAMQ5T4B2 595 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 RASGRP3Q8IV61 690 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 FBLIM1Q8WUP2 373 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 GPR137Q96N19 417 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 MRPL4Q9BYD3 311 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 SRRQ9GZT4 340 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 SHARPINQ9H0F6 387 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 PAK6Q9NQU5 681 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 MIOSQ9NXC5 875 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ANKRD28O15084 1053 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 C1RP00736 705 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ASS1P00966 412 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ACSM4P0C7M7 580 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 HGFP14210 728 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ATP5F1P24539 256 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 PTX3P26022 381 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 HOXA1P49639 335 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 RGS7P49802 495 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 YWHAEP62258 255 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 C2orf80Q0P641 193 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 DSG2Q14126 1118 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 GPR139Q6DWJ6 353 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ERICH5Q6P6B1 374 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 CPXCR1Q8N123 301 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 GPRASP2Q96D09 838 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 CCDC126Q96EE4 140 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 SPATA13Q96N96 652 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 CNPY3Q9BT09 278 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 ASAH2Q9NR71 780 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 NLKQ9UBE8 527 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 RPH3AQ9Y2J0 694 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 TNPO3Q9Y5L0 923 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
CTCFL-218ENST00000608440 POLR2AP24928 1970 aaKnown RBP12.28□□□□□ -0.44
CTCFL-218ENST00000608440 TEX46H3BTG2 121 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 LGALS8O00214 317 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 PDE9AO76083 593 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 GPD1P21695 349 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 CHMP24386 653 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 HTR1EP28566 365 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 CLCN4P51793 760 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 BACE1P56817 501 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 MCCD1P59942 119 aaPredicted RBP12.27□□□□□ -0.44
CTCFL-218ENST00000608440 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.44
CTCFL-218ENST00000608440 ASAH1Q13510 395 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 VGLL4Q14135 290 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 ZC3H12BQ5HYM0 836 aaKnown RBP12.27□□□□□ -0.44
CTCFL-218ENST00000608440 PDZK1Q5T2W1 519 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 SAXO2Q658L1 398 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 ALG1LQ6GMV1 187 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 HIPK1Q86Z02 1210 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 CDYL2Q8N8U2 506 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 SLC37A3Q8NCC5 494 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 YIPF5Q969M3 257 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 SLC47A1Q96FL8 570 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 GPR22Q99680 433 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 SNRNP25Q9BV90 132 aaKnown RBP12.27□□□□□ -0.44
CTCFL-218ENST00000608440 ACTR8Q9H981 624 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 CCNB1IP1Q9NPC3 277 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 EXOSC4Q9NPD3 245 aaKnown RBP12.27□□□□□ -0.44
CTCFL-218ENST00000608440 CASS4Q9NQ75 786 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 ACSL5Q9ULC5 683 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 BTRCQ9Y297 605 aa12.27□□□□□ -0.44
CTCFL-218ENST00000608440 A8MT66 165 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 APOC1P02654 83 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 ITGB1P05556 798 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 CSF3P09919 207 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 ATP4BP51164 291 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 ZNF143P52747 638 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-218ENST00000608440 EEFSECP57772 596 aaKnown RBP12.27□□□□□ -0.45
CTCFL-218ENST00000608440 CTBP1Q13363 440 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 CDH18Q13634 790 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 UGCGQ16739 394 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 MTERF2Q49AM1 385 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 CLLU1Q5K131 121 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 TFAP2EQ6VUC0 442 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 DET1Q7L5Y6 550 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 DENND1CQ8IV53 801 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 SLC44A2Q8IWA5 706 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-218ENST00000608440 SCUBE3Q8IX30 993 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 FAM217AQ8IXS0 508 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 DNASE1L2Q92874 299 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 QRFPRQ96P65 431 aa12.27□□□□□ -0.45
CTCFL-218ENST00000608440 MAGEL2Q9UJ55 1249 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms