RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ZNF71Q9NQZ8 489 aaPredicted RBP3.51□□□□□ -1.85
RNU6-88P-201ENST00000606801 INTS9Q9NV88 658 aaKnown RBP3.51□□□□□ -1.85
RNU6-88P-201ENST00000606801 TBC1D7Q9P0N9 293 aa3.51□□□□□ -1.85
RNU6-88P-201ENST00000606801 CPSF3Q9UKF6 684 aaKnown RBP3.51□□□□□ -1.85
RNU6-88P-201ENST00000606801 ANKRD61A6NGH8 418 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 BLOC1S5-TXNDC5H3BN57 136 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 ZNF197O14709 1029 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 PLGP00747 810 aaPredicted RBP3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 GPIP06744 558 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 SAGP10523 405 aaPredicted RBP3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 EPCAMP16422 314 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 ITGA3P26006 1051 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 CDC25CP30307 473 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 HSPA4P34932 840 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 MAZP56270 477 aaKnown RBP3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 GSDMDP57764 484 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 GNB1P62873 340 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 TUBB4BP68371 445 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 HERC3Q15034 1050 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 ODF4Q2M2E3 257 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 FAM133BQ5BKY9 247 aaKnown RBP3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 SLC25A53Q5H9E4 307 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 TCTE1Q5JU00 501 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 SUSD4Q5VX71 490 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 DCLRE1AQ6PJP8 1040 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 ABI3BPQ7Z7G0 1075 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 MFN1Q8IWA4 741 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 ZNF611Q8N823 705 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 NKAIN3Q8N8D7 197 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 KBTBD8Q8NFY9 601 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 OR4C3Q8NH37 302 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 OR52N5Q8NH56 324 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 TMEM143Q96AN5 459 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 SIPA1Q96FS4 1042 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 THOC1Q96FV9 657 aaKnown RBP3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 FAM71F1Q96KD3 344 aaPredicted RBP3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 SPATA33Q96N06 139 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 EDEM3Q9BZQ6 932 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 OR2B2Q9GZK3 357 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 TLE6Q9H808 572 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 FGF21Q9NSA1 209 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 ECHDC1Q9NTX5 307 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 POLLQ9UGP5 575 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 KCNJ14Q9UNX9 436 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 GAB2Q9UQC2 676 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 TCF19Q9Y242 345 aa3.5□□□□□ -1.85
RNU6-88P-201ENST00000606801 A0A087X002 238 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 MSGN1A6NI15 193 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 ANXA2P2A6NMY6 339 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 GRID2O43424 1007 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 PAK4O96013 591 aaPredicted RBP3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 GSRP00390 522 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 FAM157CP0CG43 387 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 FDPSP14324 419 aaKnown RBP3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 GNB3P16520 340 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 CA6P23280 308 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 WNT5AP41221 380 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 GPR17Q13304 367 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 SQLEQ14534 574 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 NPTX1Q15818 432 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 SPECC1Q5M775 1068 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 ZNF449Q6P9G9 518 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 C15orf39Q6ZRI6 1047 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 KRT77Q7Z794 578 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 OR4K1Q8NGD4 311 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 OR10Q1Q8NGQ4 319 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 OR2T11Q8NH01 316 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 LITAFQ99732 161 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 CPVLQ9H3G5 476 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 ZNF696Q9H7X3 374 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 P4HTMQ9NXG6 502 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 SPHK1Q9NYA1 384 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 STK26Q9P289 416 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 STUB1Q9UNE7 303 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 C2CD2Q9Y426 696 aa3.49□□□□□ -1.85
RNU6-88P-201ENST00000606801 A0A087WV48 116 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 C2orf81A6NN90 581 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 FAM72CH0Y354 149 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 PCDH7O60245 1069 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 CLPTM1O96005 669 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 IGKV3-20P01619 116 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 IRF2P14316 349 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 CDH3P22223 829 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 MAP2K2P36507 400 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 GP5P40197 560 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 CRKLP46109 303 aaKnown RBP3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 DLK1P80370 383 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 ROR1Q01973 937 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 PPARDQ03181 441 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 RASGEF1BQ0VAM2 473 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 HYAL1Q12794 435 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 LACTB2Q53H82 288 aaPredicted RBP3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 XKR6Q5GH73 641 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 FAM72AQ5TYM5 149 aa3.48□□□□□ -1.85
RNU6-88P-201ENST00000606801 FAM72DQ6L9T8 149 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms