RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 RGS14O43566 566 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 JUPP14923 745 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 GPX3P22352 226 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 TBPL1P62380 186 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 MAPRE2Q15555 327 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 AGKQ53H12 422 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 LRRC56Q8IYG6 542 aaPredicted RBP20.93■□□□□ 0.94
USP6NL-204ENST00000606752 C10orf67Q8IYJ2 551 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 UBALD2Q8IYN6 164 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 MCUR1Q96AQ8 359 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 BIRC7Q96CA5 298 aa20.93■□□□□ 0.94
USP6NL-204ENST00000606752 TRIT1Q9H3H1 467 aaKnown RBP20.93■□□□□ 0.94
USP6NL-204ENST00000606752 SDR39U1Q9NRG7 319 aaPredicted RBP20.93■□□□□ 0.94
USP6NL-204ENST00000606752 LSM1O15116 133 aaKnown RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 GNAZP19086 355 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 NUDT1P36639 197 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 THOP1P52888 689 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 ELF3P78545 371 aaPredicted RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 GRIK2Q13002 908 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 RPS6KA2Q15349 733 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 NR6A1Q15406 480 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 ZRSR2Q15696 482 aaKnown RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 SGO1Q5FBB7 561 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 XKR6Q5GH73 641 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 TPRG1LQ5T0D9 272 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 ABI3BPQ7Z7G0 1075 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 MIER2Q8N344 545 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 FNDC5Q8NAU1 212 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 PPP3R2Q96LZ3 170 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 INSM2Q96T92 566 aaPredicted RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 ELOVL6Q9H5J4 265 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 TBC1D17Q9HA65 648 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 CCDC167Q9P0B6 97 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 TDRKHQ9Y2W6 561 aaKnown RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 GPR45Q9Y5Y3 372 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 TRIOO75962 3097 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 MEI4A8MW99 385 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 E7EQ34 232 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 RASSF9O75901 435 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 NPPBP16860 134 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 HSD17B2P37059 387 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 MRPL19P49406 292 aaKnown RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 DIO3P55073 304 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 EMX2Q04743 252 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 PRKG2Q13237 762 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 CUL3Q13618 768 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 ARHGAP19Q14CB8 494 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 AP5B1Q2VPB7 878 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 Q6ZSR6 202 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 SELENOMQ8WWX9 145 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 RLN3Q8WXF3 142 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 PDXPQ96GD0 296 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 C12orf66Q96MD2 445 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 TPSD1Q9BZJ3 242 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 MMADHCQ9H3L0 296 aaPredicted RBP20.92■□□□□ 0.94
USP6NL-204ENST00000606752 AIG1Q9NVV5 245 aa20.92■□□□□ 0.94
USP6NL-204ENST00000606752 IGHV1OR15-9A0A0B4J2B8 117 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 STK25O00506 426 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 PI15O43692 258 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 HNF4AP41235 474 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 CASP2P42575 452 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 RABIFP47224 123 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 SLC25A3Q00325 362 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 DOC2AQ14183 400 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 SMU1Q2TAY7 513 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 UAP1L1Q3KQV9 507 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 PAOXQ6QHF9 649 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 GK5Q6ZS86 529 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 ARHGAP24Q8N264 748 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 SPEM1Q8N4L4 309 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 SETD7Q8WTS6 366 aaKnown RBP20.91■□□□□ 0.94
USP6NL-204ENST00000606752 CLDN23Q96B33 292 aa20.91■□□□□ 0.94
USP6NL-204ENST00000606752 MTFMTQ96DP5 389 aaKnown RBP20.91■□□□□ 0.94
USP6NL-204ENST00000606752 CCDC177Q9NQR7 707 aaPredicted RBP20.91■□□□□ 0.94
USP6NL-204ENST00000606752 PDYNP01213 254 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 SNRPB2P08579 225 aaKnown RBP20.9■□□□□ 0.94
USP6NL-204ENST00000606752 ERGP11308 486 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 CCND1P24385 295 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 PGM1P36871 562 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 ZNF33BQ06732 778 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 STX5Q13190 355 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 IMPG1Q17R60 797 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 FRG2Q64ET8 278 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 RGL4Q8IZJ4 473 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 FRMD1Q8N878 549 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 NEIL2Q969S2 332 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 TSACCQ96A04 125 aaPredicted RBP20.9■□□□□ 0.94
USP6NL-204ENST00000606752 FRG2BQ96QU4 278 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 FERD3LQ96RJ6 166 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 BRINP2Q9C0B6 783 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 CHRDQ9H2X0 955 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 EFCAB1Q9HAE3 211 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 PLAGL1Q9UM63 463 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 SERTM1A2A2V5 107 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 PDZK1P1A8MUH7 402 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 AIM2O14862 343 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 SCAMP1O15126 338 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 CD22P20273 847 aa20.9■□□□□ 0.94
USP6NL-204ENST00000606752 SRP54P61011 504 aaKnown RBP20.9■□□□□ 0.94
USP6NL-204ENST00000606752 HMGCS1Q01581 520 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms