RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	RPS18	P62269	152 aa	Known RBP	14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	CUL1	Q13616	776 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	ERV3-1	Q14264	604 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	CYP2A13	Q16696	494 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	DEFB109B	Q30KR1	87 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	ZNF385C	Q66K41	422 aa	Predicted RBP	14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	CNTN4	Q8IWV2	1026 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	SYTL1	Q8IYJ3	562 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	GPR135	Q8IZ08	494 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	RAB42	Q8N4Z0	105 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	CD200R1	Q8TD46	325 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	CERS2	Q96G23	380 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	SNF8	Q96H20	258 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	KRT12	Q99456	494 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	GPR21	Q99679	349 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	GPR87	Q9BY21	358 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	TRIM31	Q9BZY9	425 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	SPRTN	Q9H040	489 aa	Predicted RBP	14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	GEMIN8	Q9NWZ8	242 aa	Known RBP	14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	PLCL2	Q9UPR0	1127 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	CHMP2B	Q9UQN3	213 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	FARSA	Q9Y285	508 aa	Known RBP	14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	TEX264	Q9Y6I9	313 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	BAHCC1	Q9P281	2608 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	MED13	Q9UHV7	2174 aa		14.9	□□□□□ -0.02
PLD3-223	ENST00000600948	MDC1	Q14676	2089 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948		A0A1W2PPV9	198 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	EFCAB8	A8MWE9	144 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	MYO1C	O00159	1063 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FKBP9	O95302	570 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	CAT	P04040	527 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	CAPN1	P07384	714 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	MPC1L	P0DKB6	136 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	ENO3	P13929	434 aa	Predicted RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	PSMB5	P28074	263 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	GABRB3	P28472	473 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	CCR10	P46092	362 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	POLE2	P56282	527 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	ETF1	P62495	437 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	RPS15	P62841	145 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	TIAL1	Q01085	375 aa	Known RBP eCLIP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FASTK	Q14296	549 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	SF1	Q15637	639 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	HIF1A	Q16665	826 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	PTCHD3	Q3KNS1	767 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	STEAP4	Q687X5	459 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FCRL6	Q6DN72	434 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FIGLA	Q6QHK4	219 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FAM198B	Q6UWH4	519 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	OR9A1P	Q8NGU1	263 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	APOBEC4	Q8WW27	367 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	INPP5D	Q92835	1189 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	LRRC39	Q96DD0	335 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FAM117A	Q9C073	453 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	ADNP	Q9H2P0	1102 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	FAM114A2	Q9NRY5	505 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	STARD5	Q9NSY2	213 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	INTS7	Q9NVH2	962 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	SLC17A6	Q9P2U8	582 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	ZC3H7B	Q9UGR2	993 aa	Known RBP	14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	AP1M2	Q9Y6Q5	423 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	BOD1L1	Q8NFC6	3051 aa		14.89	□□□□□ -0.03
PLD3-223	ENST00000600948	CDC14C	A4D256	554 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	ZSCAN9	O15535	394 aa	Predicted RBP	14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	VPS26A	O75436	327 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	HBQ1	P09105	142 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	RAB40AL	P0C0E4	278 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	SFTPC	P11686	197 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	CASQ1	P31415	396 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	GRIA3	P42263	894 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	RPL21	P46778	160 aa	Known RBP	14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	CARS	P49589	748 aa	Known RBP	14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	ARL4C	P56559	192 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	KCNAB2	Q13303	367 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	RHBDD2	Q6NTF9	364 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	TRMT10B	Q6PF06	316 aa	Known RBP	14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	CYHR1	Q6ZMK1	362 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	KIAA0408	Q6ZU52	694 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	GALNT7	Q86SF2	657 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	SYVN1	Q86TM6	617 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	CPNE9	Q8IYJ1	553 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	FBXO15	Q8NCQ5	510 aa	Predicted RBP	14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	SPATA4	Q8NEY3	305 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	OR2A1	Q8NGT9	310 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	GABPB2	Q8TAK5	448 aa	Predicted RBP	14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	ASB11	Q8WXH4	323 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	CFAP36	Q96G28	342 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	NDN	Q99608	321 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	MIPEP	Q99797	713 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	NLN	Q9BYT8	704 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	SLC7A5P2	Q9GIP4	190 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	EURL	Q9NYK6	297 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	TUBD1	Q9UJT1	453 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	POLH	Q9Y253	713 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	KLK4	Q9Y5K2	254 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	KCNMB2	Q9Y691	235 aa		14.88	□□□□□ -0.03
PLD3-223	ENST00000600948	HELZ2	Q9BYK8	2649 aa	Known RBP	14.87	□□□□□ -0.03
PLD3-223	ENST00000600948		B8ZZF3	427 aa		14.87	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms