RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 DLX3O60479 287 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 RFPL3O75679 317 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 IPO13O94829 963 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 RPLP0P05388 317 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 CEACAM1P13688 526 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 NCF1P14598 390 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 AMD1P17707 334 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 POLR2CP19387 275 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 ATP5F1P24539 256 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 RPA3P35244 121 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 ALDH18A1P54886 795 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 TBPL1P62380 186 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 NFKB2Q00653 900 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 NAE1Q13564 534 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 KIR2DS3Q14952 304 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 PFKFB4Q16877 469 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 C18orf21Q32NC0 220 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 PTCHD3Q3KNS1 767 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 NKAIN2Q5VXU1 208 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 WDR74Q6RFH5 385 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 ZYG11AQ6WRX3 759 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 OOSP2Q86WS3 158 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 SYTL1Q8IYJ3 562 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 FBXO39Q8N4B4 442 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 GOLGA6L1Q8N7Z2 621 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 PPFIBP2Q8ND30 876 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 RDH11Q8TC12 318 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 FAM111AQ96PZ2 611 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 EGFL8Q99944 293 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 IQCGQ9H095 443 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 ATG10Q9H0Y0 220 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 ABCG4Q9H172 646 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 ACTR10Q9NZ32 417 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 PDP2Q9P2J9 529 aa12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-206ENST00000600118 CEP250Q9BV73 2442 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 GOLGA4Q13439 2230 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 MN1Q10571 1320 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 TMEM120BA0PK00 339 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 PIPSLA2A3N6 862 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 C2orf74A8MZ97 194 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 MATN2O00339 956 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 TM9SF1O15321 606 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 SMIM24O75264 130 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 ZWINTO95229 277 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 CPNE6O95741 557 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 C9P02748 559 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 DHRS4L1P0CG22 281 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 GFAPP14136 432 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 TAC1P20366 129 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 AGTR2P50052 363 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 PPP1CAP62136 330 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 E2F1Q01094 437 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 RSPO4Q2I0M5 234 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 AMZ1Q400G9 498 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 SUSD1Q6UWL2 747 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 USP53Q70EK8 1073 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 TMPRSS9Q7Z410 1059 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 SLCO6A1Q86UG4 719 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 ALYREFQ86V81 257 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 C2orf73Q8N5S3 287 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 PTGR2Q8N8N7 351 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 ARMC2Q8NEN0 867 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 OR2A1Q8NGT9 310 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 WDR48Q8TAF3 677 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 PYCR2Q96C36 320 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 OR2A14Q96R47 310 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 OR4K3Q96R72 315 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 NUDT22Q9BRQ3 303 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 C1QTNF3Q9BXJ4 246 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 CD244Q9BZW8 370 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 CCDC177Q9NQR7 707 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 INTS7Q9NVH2 962 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 WWOXQ9NZC7 414 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 SEMA5BQ9P283 1151 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 COPG2Q9UBF2 871 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 POMT2Q9UKY4 750 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 ASB1Q9Y576 335 aa12.22□□□□□ -0.45
CHMP2A-206ENST00000600118 SPAARA0A1B0GVQ0 90 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CAPN5O15484 640 aaPredicted RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 STK16O75716 305 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 MYL2P10916 166 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CDK4P11802 303 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CPA3P15088 417 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 UGT2B7P16662 529 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 SDHBP21912 280 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 CCND1P24385 295 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 OAS2P29728 719 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PRDX3P30048 256 aaKnown RBP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 GDF5P43026 501 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PRKAA2P54646 552 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 GFERP55789 205 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PRKAA1Q13131 559 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PCLAFQ15004 111 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC5A12Q1EHB4 618 aa12.21□□□□□ -0.45
CHMP2A-206ENST00000600118 FBXO48Q5FWF7 155 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms