RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 SBSNQ6UWP8 590 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 CDHR3Q6ZTQ4 885 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 UBE2R2Q712K3 238 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 TIPARPQ7Z3E1 657 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 TAX1BP1Q86VP1 789 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 ZNF248Q8NDW4 579 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 MAGEC3Q8TD91 643 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 CDKL2Q92772 493 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 RAB11FIP5Q9BXF6 653 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 ANKZF1Q9H8Y5 726 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 POPDC3Q9HBV1 291 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 PILRAQ9UKJ1 303 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 TMEM184BQ9Y519 407 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 KLK4Q9Y5K2 254 aa18.81■□□□□ 0.6
SHKBP1-221ENST00000599833 CHD6Q8TD26 2715 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 E7ENX8 843 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 KDM1AO60341 852 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 CTSBP07858 339 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 CD82P27701 267 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 ITPKBP27987 946 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 GMPRP36959 345 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 RGS4P49798 205 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 IL2P60568 153 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 POU4F1Q01851 419 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 TAP2Q03519 686 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 SP140Q13342 867 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 IL11RAQ14626 422 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 ARHGAP19Q14CB8 494 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 GPR19Q15760 415 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 GRTP1Q5TC63 336 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 KIAA1614Q5VZ46 1190 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 FCRL6Q6DN72 434 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 MBOAT1Q6ZNC8 495 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 CTAGE3PQ8IX95 158 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 SPACA3Q8IXA5 215 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 GSPT2Q8IYD1 628 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 C19orf47Q8N9M1 422 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 ASPSCR1Q9BZE9 553 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 TSPYL1Q9H0U9 437 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 SLC39A10Q9ULF5 831 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 KLHL20Q9Y2M5 609 aa18.8■□□□□ 0.6
SHKBP1-221ENST00000599833 IGKV1-8A0A0C4DH67 115 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 ISM1B1AKI9 464 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 POLR1CO15160 346 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 SLC16A5O15375 505 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 NRP2O60462 931 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 ACSL3O95573 720 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 C8GP07360 202 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 PNLIPRP1P54315 467 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 TUBB4BP68371 445 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 TLE3Q04726 772 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 ILF2Q12905 390 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 SRSF6Q13247 344 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 TUBB3Q13509 450 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 CEACAM20Q6UY09 585 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 CEP128Q6ZU80 1094 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 DNAJC22Q8N4W6 341 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 EIF1ADQ8N9N8 165 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 PPFIBP2Q8ND30 876 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 UBXN10Q96LJ8 280 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 TEFMQ96QE5 360 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 ZPBPQ9BS86 351 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 SYNPO2LQ9H987 977 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 PARVBQ9HBI1 364 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 FGF21Q9NSA1 209 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 STOX2Q9P2F5 926 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 SEC16AO15027 2179 aa18.79■□□□□ 0.6
SHKBP1-221ENST00000599833 MDC1Q14676 2089 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 PHGDHO43175 533 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 EFSO43281 561 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 ZBTB14O43829 449 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 LIPCP11150 499 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 MAGP20916 626 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 SAT1P21673 171 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 TNFRSF8P28908 595 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 OAS2P29728 719 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 GRIA3P42263 894 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 ACY1Q03154 408 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 FOXM1Q08050 763 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 TEX35Q5T0J7 233 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 PWWP2BQ6NUJ5 590 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 TTC23LQ6PF05 361 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 SUSD1Q6UWL2 747 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 MYO1HQ8N1T3 1032 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 OR2L3Q8NG85 312 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 OR1L3Q8NH93 324 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 RNF31Q96EP0 1072 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 NAF1Q96HR8 494 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 DPH1Q9BZG8 443 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 SLC6A20Q9NP91 592 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 ENAMQ9NRM1 1142 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 ZFYVE26Q68DK2 2539 aa18.78■□□□□ 0.6
SHKBP1-221ENST00000599833 TEX51A0A1B0GUA7 166 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 CDC7O00311 574 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 STK17BO94768 372 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 WT1P19544 449 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 GCAP28676 217 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms