RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 TSR3Q9UJK0 312 aaKnown RBP14.49□□□□□ -0.09
LIG1-215ENST00000597901 VPS9D1Q9Y2B5 631 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 MAD1L1Q9Y6D9 718 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 KRT87PA6NCN2 255 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 TARM1B6A8C7 271 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 C9J4A7 227 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 KLF7O75840 302 aaPredicted RBP14.48□□□□□ -0.09
LIG1-215ENST00000597901 USP1O94782 785 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 FKBP9O95302 570 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 F7P08709 466 aaPredicted RBP14.48□□□□□ -0.09
LIG1-215ENST00000597901 ALAS2P22557 587 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 ATP5DP30049 168 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 PTGIRP43119 386 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 KLRB1Q12918 225 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 CHAF1BQ13112 559 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 PPP1R7Q15435 360 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 CYP2A13Q16696 494 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 KLHL38Q2WGJ6 581 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 ZC3H12BQ5HYM0 836 aaKnown RBP14.48□□□□□ -0.09
LIG1-215ENST00000597901 CPZQ66K79 652 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 ZNF470Q6ECI4 717 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 TEX19Q8NA77 164 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 OR2A1Q8NGT9 310 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 PROKR1Q8TCW9 393 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 C17orf62Q9BQA9 187 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 NDC1Q9BTX1 674 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 DHRS4Q9BTZ2 278 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 ACSS2Q9NR19 701 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 FBXO6Q9NRD1 293 aaPredicted RBP14.48□□□□□ -0.09
LIG1-215ENST00000597901 C20orf96Q9NUD7 363 aaPredicted RBP14.48□□□□□ -0.09
LIG1-215ENST00000597901 TXLNGQ9NUQ3 528 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 FAM169AQ9Y6X4 670 aa14.48□□□□□ -0.09
LIG1-215ENST00000597901 PIKFYVEQ9Y2I7 2098 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 A0A1W2PPV9 198 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 E5RI56 91 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 HAUS5O94927 633 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 PDGFAP04085 211 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 CD63P08962 238 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 GCGRP47871 477 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 CLCN7P51798 805 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 ARSFP54793 590 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 FASTKQ14296 549 aaKnown RBP14.47□□□□□ -0.09
LIG1-215ENST00000597901 SSPNQ14714 243 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 LONRF1Q17RB8 773 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 NKAIN1Q4KMZ8 207 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 COLEC12Q5KU26 742 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 RNASEH2BQ5TBB1 312 aaKnown RBP14.47□□□□□ -0.09
LIG1-215ENST00000597901 ZNF549Q6P9A3 640 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 LMNTD2Q8IXW0 634 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 OR9A1PQ8NGU1 263 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 SLC30A3Q99726 388 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 MIPEPQ99797 713 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 DDX47Q9H0S4 455 aaKnown RBP14.47□□□□□ -0.09
LIG1-215ENST00000597901 EPN3Q9H201 632 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 MLXIPLQ9NP71 852 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 SPATA7Q9P0W8 599 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 IFT80Q9P2H3 777 aaPredicted RBP14.47□□□□□ -0.09
LIG1-215ENST00000597901 KLHL42Q9P2K6 505 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 GPN3Q9UHW5 284 aaPredicted RBP14.47□□□□□ -0.09
LIG1-215ENST00000597901 SRPK3Q9UPE1 567 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 MED16Q9Y2X0 877 aa14.47□□□□□ -0.09
LIG1-215ENST00000597901 USP27XA6NNY8 438 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 SRPX2O60687 465 aaPredicted RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 CTSVO60911 334 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 PSIP1O75475 530 aaKnown RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 TCP1P17987 556 aaKnown RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 YBX1P67809 324 aaKnown RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 HSP90AA5PQ58FG0 334 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 MRPL14Q6P1L8 145 aaKnown RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 FBXO42Q6P3S6 717 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 CYHR1Q6ZMK1 362 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 TTLL10Q6ZVT0 673 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 NEK10Q6ZWH5 1172 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 MED25Q71SY5 747 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 SPNS2Q8IVW8 549 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 OR2L3Q8NG85 312 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 CALML6Q8TD86 181 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 INPP5DQ92835 1189 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 ZNF285Q96NJ3 590 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 PKP4Q99569 1192 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 SLC25A23Q9BV35 468 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 CCDC68Q9H2F9 335 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 ENAMQ9NRM1 1142 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 SLC22A11Q9NSA0 550 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 PCYOX1Q9UHG3 505 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 FBXO5Q9UKT4 447 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 PADI2Q9Y2J8 665 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 DHRS7Q9Y394 339 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 PTRH2Q9Y3E5 179 aaKnown RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 PCDHGA9Q9Y5G4 932 aaKnown RBP14.46□□□□□ -0.09
LIG1-215ENST00000597901 KLK4Q9Y5K2 254 aa14.46□□□□□ -0.09
LIG1-215ENST00000597901 ARHGEF33A8MVX0 844 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
LIG1-215ENST00000597901 CNOT3O75175 753 aaKnown RBP14.45□□□□□ -0.1
LIG1-215ENST00000597901 CEACAM4O75871 244 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 ONECUT2O95948 504 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 MCM3P25205 808 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 IVDP26440 423 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 PSMB5P28074 263 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms