RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 FBXO8Q9NRD0 319 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SIDT1Q9NXL6 827 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PDE10AQ9Y233 779 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PCDHB11Q9Y5F2 797 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PCDHGA7Q9Y5G6 932 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 V9GYY5 206 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SDK2Q58EX2 2172 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 APC2O95996 2303 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SPTBP11277 2137 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 EXOC1LA0A1B0GW35 172 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 POLR1CO15160 346 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 NVLO15381 856 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 PRAMEF10O60809 474 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC16A8O95907 504 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 EBLN1P0CF75 366 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 ERGP11308 486 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 MSH2P43246 934 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 BMPR2Q13873 1038 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 FASTKQ14296 549 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 SF1Q15637 639 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 DCAF12Q5T6F0 453 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 MROH9Q5TGP6 573 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 TAOK1Q7L7X3 1001 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 SYTL1Q8IYJ3 562 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 D2HGDHQ8N465 521 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 FLVCR1-AS1Q8TAF5 88 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC44A1Q8WWI5 657 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 SMPDL3AQ92484 453 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 DLG3Q92796 817 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 FGF11Q92914 225 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 TRAPPC9Q96Q05 1148 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 OR6C1Q96RD1 312 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 PAFAH2Q99487 392 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 CTRCQ99895 268 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 DDA1Q9BW61 102 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 TXLNGYQ9BZA5 131 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 ASPSCR1Q9BZE9 553 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 TWSG1Q9GZX9 223 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 PDE7BQ9NP56 450 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 BTRCQ9Y297 605 aa18.98■□□□□ 0.63
SHKBP1-214ENST00000597396 URB1O60287 2271 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 ANKRD11Q6UB99 2663 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 NPEPPSL1A6NEC2 478 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 C9orf172C9J069 976 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 CCDC166P0CW27 439 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 RPA3P35244 121 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 SERPINB9P50453 376 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 PCBP4P57723 403 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 ACY1Q03154 408 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 KCNAB1Q14722 419 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 ZKSCAN8Q15776 578 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 PHKG1Q16816 387 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 CMC1Q7Z7K0 106 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 C19orf47Q8N9M1 422 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 ZNF480Q8WV37 535 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 ANKRD49Q8WVL7 239 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 ANKRD7Q92527 254 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 PMEPA1Q969W9 287 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 CCDC138Q96M89 665 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 TEFMQ96QE5 360 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 B3GNT4Q9C0J1 378 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 APMAPQ9HDC9 416 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 INTS7Q9NVH2 962 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 CTNNAL1Q9UBT7 734 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 PCDHGA3Q9Y5H0 932 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 B3GALT1Q9Y5Z6 326 aa18.97■□□□□ 0.63
SHKBP1-214ENST00000597396 TLX3O43711 291 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 FKBP9O95302 570 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 ENO2P09104 434 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 FOLR1P15328 257 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 PSMB5P28074 263 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 CRABP2P29373 138 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 VSNL1P62760 191 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 TUBB3Q13509 450 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 C19orf48Q6RUI8 117 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 SUSD1Q6UWL2 747 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 MBOAT1Q6ZNC8 495 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 FRA10AC1Q70Z53 315 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 ADAMTSL2Q86TH1 951 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 FAM20CQ8IXL6 584 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 PPFIBP2Q8ND30 876 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 SNIP1Q8TAD8 396 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 UBLCP1Q8WVY7 318 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 ZPBPQ9BS86 351 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 UNKQ9C0B0 810 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 DERL2Q9GZP9 239 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 FANCEQ9HB96 536 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 ABCF3Q9NUQ8 709 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 ARL15Q9NXU5 204 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 FOXJ2Q9P0K8 574 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 STOX2Q9P2F5 926 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 RARRES3Q9UL19 164 aa18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 MDC1Q14676 2089 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-214ENST00000597396 A0A1W2PPV9 198 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 CDC7O00311 574 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 PRICKLE3O43900 615 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 KRT38O76015 456 aa18.95■□□□□ 0.62
SHKBP1-214ENST00000597396 WISP3O95389 354 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms