RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SIDT2Q8NBJ9 832 aaKnown RBP19.04■□□□□ 0.64
LSM4-203ENST00000593829 ALKBH8Q96BT7 664 aaKnown RBP19.04■□□□□ 0.64
LSM4-203ENST00000593829 CCDC74BQ96LY2 380 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 GPR21Q99679 349 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 DHRS4Q9BTZ2 278 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 ZFP69BQ9UJL9 534 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 DHRS7Q9Y394 339 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 PSAT1Q9Y617 370 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 CCDC187A0A096LP49 1063 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 TM9SF1O15321 606 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 AHCYL1O43865 530 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 FESP07332 822 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 TROVE2P10155 538 aaKnown RBP eCLIP19.03■□□□□ 0.64
LSM4-203ENST00000593829 ABCG1P45844 678 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 EIF3IQ13347 325 aaKnown RBP19.03■□□□□ 0.64
LSM4-203ENST00000593829 UGT3A1Q6NUS8 523 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 OR4E2Q8NGC2 313 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 OR52E1Q8NGJ3 308 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 WDR36Q8NI36 951 aaKnown RBP19.03■□□□□ 0.64
LSM4-203ENST00000593829 NXPE2Q96DL1 559 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 SLC30A3Q99726 388 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 RAB33BQ9H082 229 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 VPS11Q9H270 941 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 SRMSQ9H3Y6 488 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 SMYD2Q9NRG4 433 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 TAS2R13Q9NYV9 303 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 STOML1Q9UBI4 398 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 EPHA6Q9UF33 1036 aa19.03■□□□□ 0.64
LSM4-203ENST00000593829 MN1Q10571 1320 aaPredicted RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 OR5K3A6NET4 321 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 POC1B-GALNT4F8VUJ3 575 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 CAPN5O15484 640 aaPredicted RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 KDM1AO60341 852 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 ACSBG2Q5FVE4 666 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 SNAP47Q5SQN1 464 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 RBM20Q5T481 1227 aaKnown RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 RAB11FIP2Q7L804 512 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 CLNKQ7Z7G1 428 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 OOSP2Q86WS3 158 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 ZDHHC12Q96GR4 267 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 FOPNLQ96NB1 174 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 DENND2DQ9H6A0 471 aaPredicted RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 HRASLS2Q9NWW9 162 aa19.02■□□□□ 0.64
LSM4-203ENST00000593829 AKAP7Q9P0M2 348 aaPredicted RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 TRMT6Q9UJA5 497 aaKnown RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 TDRKHQ9Y2W6 561 aaKnown RBP19.02■□□□□ 0.64
LSM4-203ENST00000593829 CEP295Q9C0D2 2601 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 OR6C74A6NCV1 312 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 FAM159BA6NKW6 160 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 HGSO14964 777 aaPredicted RBP19.02■□□□□ 0.63
LSM4-203ENST00000593829 C9P02748 559 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 GFERP55789 205 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 RTP5Q14D33 572 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 TAF1BQ53T94 588 aaPredicted RBP19.02■□□□□ 0.63
LSM4-203ENST00000593829 C3orf38Q5JPI3 329 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 FAM91A1Q658Y4 838 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 IRGCQ6NXR0 463 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 RCBTB1Q8NDN9 531 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 CD200R1Q8TD46 325 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 TGM7Q96PF1 710 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 CMKLR1Q99788 373 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 TMEM121BQ9BXQ6 578 aaPredicted RBP19.02■□□□□ 0.63
LSM4-203ENST00000593829 POLR1BQ9H9Y6 1135 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 KLHL3Q9UH77 587 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 SATB2Q9UPW6 733 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 AK5Q9Y6K8 562 aa19.02■□□□□ 0.63
LSM4-203ENST00000593829 CCDC22O60826 627 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 PIAS1O75925 651 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 MPOP05164 745 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 CD9P21926 228 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 PHBP35232 272 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 LSSP48449 732 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 PTDSS1P48651 473 aaKnown RBP19.01■□□□□ 0.63
LSM4-203ENST00000593829 GABREP78334 506 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 ILF2Q12905 390 aaKnown RBP19.01■□□□□ 0.63
LSM4-203ENST00000593829 KLHL38Q2WGJ6 581 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 HECTD2Q5U5R9 776 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 ARMC6Q6NXE6 501 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 TTC23LQ6PF05 361 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 NEK10Q6ZWH5 1172 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 ZC3HC1Q86WB0 502 aaKnown RBP19.01■□□□□ 0.63
LSM4-203ENST00000593829 AMIGO1Q86WK6 493 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 DCUN1D3Q8IWE4 304 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 FBXO39Q8N4B4 442 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 DNAJC9Q8WXX5 260 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 MMADHCQ9H3L0 296 aaPredicted RBP19.01■□□□□ 0.63
LSM4-203ENST00000593829 TXNDC16Q9P2K2 825 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 TSR3Q9UJK0 312 aaKnown RBP19.01■□□□□ 0.63
LSM4-203ENST00000593829 VWA7Q9Y334 891 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 AKAP13Q12802 2813 aa19.01■□□□□ 0.63
LSM4-203ENST00000593829 CXorf49A8MYA2 514 aaPredicted RBP19■□□□□ 0.63
LSM4-203ENST00000593829 TGDSO95455 350 aa19■□□□□ 0.63
LSM4-203ENST00000593829 MATN4O95460 622 aa19■□□□□ 0.63
LSM4-203ENST00000593829 CBSLP0DN79 551 aa19■□□□□ 0.63
LSM4-203ENST00000593829 ENO3P13929 434 aaPredicted RBP19■□□□□ 0.63
LSM4-203ENST00000593829 CBSP35520 551 aa19■□□□□ 0.63
LSM4-203ENST00000593829 CDKN2DP55273 166 aa19■□□□□ 0.63
LSM4-203ENST00000593829 TIAL1Q01085 375 aaKnown RBP eCLIP19■□□□□ 0.63
LSM4-203ENST00000593829 OCRLQ01968 901 aa19■□□□□ 0.63
LSM4-203ENST00000593829 KLC1Q07866 573 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms