RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GPR21Q99679 349 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 GPR87Q9BY21 358 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 SPRTNQ9H040 489 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CHST8Q9H2A9 424 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CCDC68Q9H2F9 335 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 ACTR5Q9H9F9 607 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CHMP2BQ9UQN3 213 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 SNX24Q9Y343 169 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 TLN1Q9Y490 2541 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 E7EQ34 232 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 CREG1O75629 220 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 RECKO95980 971 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 KLK3P07288 261 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 CAPN1P07384 714 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 ERGP11308 486 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 PSMB5P28074 263 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 CARSP49589 748 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 C19orf57Q0VDD7 668 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 CBLBQ13191 982 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 ERV3-1Q14264 604 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 FASTKQ14296 549 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 SF1Q15637 639 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 TEDDM1Q5T9Z0 273 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 STEAP4Q687X5 459 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 FCRL6Q6DN72 434 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 TRMT10BQ6PF06 316 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 OR9A1PQ8NGU1 263 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 ASB11Q8WXH4 323 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 MR1Q95460 341 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 CLIP3Q96DZ5 547 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 CERS2Q96G23 380 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 ARHGAP9Q9BRR9 750 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 ACTL8Q9H568 366 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 SLC17A6Q9P2U8 582 aa17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 ZC3H7BQ9UGR2 993 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-202ENST00000593764 GFYI3L273 518 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 MYO1CO00159 1063 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 OR2B3O76000 313 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 MPC1LP0DKB6 136 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 PTPN4P29074 926 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 ARL4CP56559 192 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 RPS18P62269 152 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 COL9A2Q14055 689 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 DEFB109BQ30KR1 87 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 TTLL9Q3SXZ7 439 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 ZNF385CQ66K41 422 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 FIGLAQ6QHK4 219 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 KIAA0408Q6ZU52 694 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 GALNT7Q86SF2 657 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 GPR135Q8IZ08 494 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 OR2A1Q8NGT9 310 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 N4BP2L2Q92802 583 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 CFAP36Q96G28 342 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 NDNQ99608 321 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 SPATA7Q9P0W8 599 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 PLCL2Q9UPR0 1127 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 FARSAQ9Y285 508 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 KLK4Q9Y5K2 254 aa17.78■□□□□ 0.44
SHKBP1-202ENST00000593764 ZNF462Q96JM2 2506 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 SPTA1P02549 2419 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 FER1L5A0AVI2 2057 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 E7ESA3 106 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 RAD51CO43502 376 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 FKBP9O95302 570 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 CBSLP0DN79 551 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 ENO3P13929 434 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 CBSP35520 551 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 GRIA3P42263 894 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 CDKN2DP55273 166 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 YBX1P67809 324 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 FASTKD3Q14CZ7 662 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 PTCHD3Q3KNS1 767 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 RBM20Q5T481 1227 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 MCATQ8IVS2 390 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 CPNE9Q8IYJ1 553 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 SYTL1Q8IYJ3 562 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 RAB42Q8N4Z0 105 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 FBXO15Q8NCQ5 510 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 ZUFSPQ96AP4 578 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 PKP4Q99569 1192 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 MIPEPQ99797 713 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 ERP44Q9BS26 406 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 FAM114A2Q9NRY5 505 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 GEMIN8Q9NWZ8 242 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 EURLQ9NYK6 297 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 AP1M2Q9Y6Q5 423 aa17.77■□□□□ 0.44
SHKBP1-202ENST00000593764 PCM1Q15154 2024 aa17.77■□□□□ 0.43
SHKBP1-202ENST00000593764 FAM187AA6NFU0 413 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 TARM1B6A8C7 271 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 VPS26AO75436 327 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 CATP04040 527 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 HBQ1P09105 142 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 RAB40ALP0C0E4 278 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 CCR10P46092 362 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 GCGRP47871 477 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 POLE2P56282 527 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 RPS15P62841 145 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 C2orf54Q08AI8 447 aa17.76■□□□□ 0.43
SHKBP1-202ENST00000593764 PDIA2Q13087 525 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms