RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ASIC3Q9UHC3 531 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 TLK1Q9UKI8 766 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 TCFL5Q9UL49 500 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 TP53TG5Q9Y2B4 290 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 MRFAP1Q9Y605 127 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 AP1M2Q9Y6Q5 423 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 PCSK5Q92824 1860 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 BOD1L1Q8NFC6 3051 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 ARGFXA6NJG6 315 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 DNALI1O14645 258 aaPredicted RBP13.34□□□□□ -0.27
APOC1-208ENST00000592535 AGXTP21549 392 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 GRIA3P42263 894 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 SLC1A2P43004 574 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 PTGIRP43119 386 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 CLCN7P51798 805 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 CHAF1BQ13112 559 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 PTK6Q13882 451 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 LONRF1Q17RB8 773 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 KLHL38Q2WGJ6 581 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.34□□□□□ -0.27
APOC1-208ENST00000592535 ZNF549Q6P9A3 640 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 TLDC1Q6P9B6 456 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 FIGLAQ6QHK4 219 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 MCATQ8IVS2 390 aaKnown RBP13.34□□□□□ -0.27
APOC1-208ENST00000592535 APLFQ8IW19 511 aaPredicted RBP13.34□□□□□ -0.27
APOC1-208ENST00000592535 RAB42Q8N4Z0 105 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 GIMAP7Q8NHV1 300 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 HMGCLL1Q8TB92 370 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 MAGEC3Q8TD91 643 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 SLCO2A1Q92959 643 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 CAPZA3Q96KX2 299 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 GBP5Q96PP8 586 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 INTS7Q9NVH2 962 aaKnown RBP13.34□□□□□ -0.27
APOC1-208ENST00000592535 SPATA7Q9P0W8 599 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 PCYOX1Q9UHG3 505 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 MED16Q9Y2X0 877 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 FAM169AQ9Y6X4 670 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 ANKRD12Q6UB98 2062 aa13.34□□□□□ -0.27
APOC1-208ENST00000592535 HEATR5BQ9P2D3 2071 aa13.33□□□□□ -0.27
APOC1-208ENST00000592535 A0A1W2PPV9 198 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 ARHGEF33A8MVX0 844 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 C9J4A7 227 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 BANF1O75531 89 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 PGAM1P18669 254 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 GNG11P61952 73 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 MPP1Q00013 466 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 DHX9Q08211 1270 aaKnown RBP13.33□□□□□ -0.28
APOC1-208ENST00000592535 CUL1Q13616 776 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 FASTKQ14296 549 aaKnown RBP13.33□□□□□ -0.28
APOC1-208ENST00000592535 SLC9A5Q14940 896 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 COLEC12Q5KU26 742 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 MLIPQ5VWP3 458 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.28
APOC1-208ENST00000592535 TCTN3Q6NUS6 607 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 LMNTD2Q8IXW0 634 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
APOC1-208ENST00000592535 PROKR1Q8TCW9 393 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 MIPEPQ99797 713 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 NDC1Q9BTX1 674 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 CCDC68Q9H2F9 335 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 IARS2Q9NSE4 1012 aaKnown RBP13.33□□□□□ -0.28
APOC1-208ENST00000592535 TXLNGQ9NUQ3 528 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 FBXO5Q9UKT4 447 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 PYCARDQ9ULZ3 195 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 SRPK3Q9UPE1 567 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 BSNQ9UPA5 3926 aa13.33□□□□□ -0.28
APOC1-208ENST00000592535 MDC1Q14676 2089 aaKnown RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 NRP2O60462 931 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 CTSVO60911 334 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 PSIP1O75475 530 aaKnown RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 HAUS5O94927 633 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 FKBP9O95302 570 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 PDGFAP04085 211 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 MCM3P25205 808 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 IVDP26440 423 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 GCGRP47871 477 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 YBX1P67809 324 aaKnown RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 DCDP81605 110 aaKnown RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 TLE1Q04724 770 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 CRYMQ14894 314 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 CYP2A13Q16696 494 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 TTLL9Q3SXZ7 439 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 MSS51Q4VC12 460 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 HSP90AA5PQ58FG0 334 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 ZC3H12BQ5HYM0 836 aaKnown RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 KCNMB4Q86W47 210 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 CREG2Q8IUH2 290 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 KLHL7Q8IXQ5 586 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 OR2L3Q8NG85 312 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 OR2A1Q8NGT9 310 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 OR9A1PQ8NGU1 263 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 CALML6Q8TD86 181 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 ANP32BQ92688 251 aaKnown RBP13.32□□□□□ -0.28
APOC1-208ENST00000592535 KCNJ9Q92806 393 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 ZUFSPQ96AP4 578 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 GPR21Q99679 349 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 FAM167BQ9BTA0 163 aa13.32□□□□□ -0.28
APOC1-208ENST00000592535 DHRS4Q9BTZ2 278 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms