RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 PPP1R32Q7Z5V6 425 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 TMEM151BQ8IW70 566 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 RAB42Q8N4Z0 105 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 SSC4DQ8WTU2 575 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 RAD51AP1Q96B01 352 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 MENTQ9BUN1 341 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 RAB11FIP5Q9BXF6 653 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 MARCH4Q9P2E8 410 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 B3GNT3Q9Y2A9 372 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 MRFAP1Q9Y605 127 aa17.23■□□□□ 0.35
PRKCSH-211ENST00000590098 NUP210LQ5VU65 1888 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 A0A1B0GX78 115 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 AGPSO00116 658 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 CNOT3O75175 753 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 NDUFS3O75489 264 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 UMODP07911 640 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 GRIA3P42263 894 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 NPY2RP49146 381 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 FOXL2P58012 376 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 GRB7Q14451 532 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 GRM7Q14831 915 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 CCNG2Q16589 344 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 YOD1Q5VVQ6 348 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 GSTA5Q7RTV2 222 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 OTOAQ7RTW8 1153 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 OVCH1Q7RTY7 1134 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 GAS2L3Q86XJ1 694 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 MPP5Q8N3R9 675 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 ZADH2Q8N4Q0 377 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 OTUD6BQ8N6M0 293 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 LMNTD1Q8N9Z9 388 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 ZUFSPQ96AP4 578 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 FKBP10Q96AY3 582 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 NACC2Q96BF6 587 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 IL22Q9GZX6 179 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 ILKAPQ9H0C8 392 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 EIF2B3Q9NR50 452 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 CUEDC1Q9NWM3 386 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 BFARQ9NZS9 450 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 TTC7AQ9ULT0 858 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-211ENST00000590098 PCM1Q15154 2024 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 UNC79Q9P2D8 2635 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 DSCR3O14972 297 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 FKBP9O95302 570 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 ALBP02768 609 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 RNF224P0DH78 156 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 SOX8P57073 446 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 CRADDP78560 199 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 BASP1P80723 227 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 MRPL49Q13405 166 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 EIF2S3LQ2VIR3 472 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 MEI1Q5TIA1 1274 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 FCRL6Q6DN72 434 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 IGFL3Q6UXB1 125 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 TTC29Q8NA56 475 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 PRR7Q8TB68 274 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 SNRNP40Q96DI7 357 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 C19orf60Q96EN9 201 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 FOPNLQ96NB1 174 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 SELENOSQ9BQE4 189 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 P2RY12Q9H244 342 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 ZNF552Q9H707 407 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 WDR54Q9H977 334 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 SLC22A11Q9NSA0 550 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 CUTCQ9NTM9 273 aa17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 PLEKHB1Q9UF11 243 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 DRG1Q9Y295 367 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-211ENST00000590098 NOTCH2Q04721 2471 aa17.21■□□□□ 0.34
PRKCSH-211ENST00000590098 DOCK10Q96BY6 2186 aa17.21■□□□□ 0.34
PRKCSH-211ENST00000590098 MDC1Q14676 2089 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 CNTRLQ7Z7A1 2325 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 TARM1B6A8C7 271 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 SEMA7AO75326 666 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 C1orf105O95561 183 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 MMP11P24347 488 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 ITGA3P26006 1051 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 CCNFP41002 786 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 GCGRP47871 477 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 FAM214AQ32MH5 1076 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 SDCCAG8Q86SQ7 713 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 CISD2Q8N5K1 135 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 TREX1Q9NSU2 369 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 IL1RAPL1Q9NZN1 696 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
PRKCSH-211ENST00000590098 MASP2O00187 686 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 PFDN6O15212 129 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 SRPX2O60687 465 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 ONECUT2O95948 504 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 ITGAXP20702 1163 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 RPS3P23396 243 aaKnown RBP eCLIP17.19■□□□□ 0.349e-11■■■■□ 21.9
PRKCSH-211ENST00000590098 MCM3P25205 808 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 NMBRP28336 390 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 BDKRB1P46663 353 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 NKG7Q16617 165 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 IRAK1BP1Q5VVH5 260 aa17.19■□□□□ 0.34
PRKCSH-211ENST00000590098 MRNIPQ6NTE8 343 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms