RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 FAM169AQ9Y6X4 670 aa20.26■□□□□ 0.83
TMC6-213ENST00000589933 DOCK10Q96BY6 2186 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 TARM1B6A8C7 271 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 DDAH2O95865 285 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 CDC25BP30305 580 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 CCNFP41002 786 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 NPY2RP49146 381 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 SESN2P58004 480 aaPredicted RBP20.25■□□□□ 0.83
TMC6-213ENST00000589933 BASP1P80723 227 aaKnown RBP20.25■□□□□ 0.83
TMC6-213ENST00000589933 ELOAQ14241 798 aaKnown RBP20.25■□□□□ 0.83
TMC6-213ENST00000589933 CCNG2Q16589 344 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 FIGLAQ6QHK4 219 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 IGFL3Q6UXB1 125 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 SDCCAG8Q86SQ7 713 aaPredicted RBP20.25■□□□□ 0.83
TMC6-213ENST00000589933 TAX1BP1Q86VP1 789 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 VRK3Q8IV63 474 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 Q8NA96 180 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 SPC24Q8NBT2 197 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 PRR7Q8TB68 274 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 SELENOSQ9BQE4 189 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 WDR54Q9H977 334 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 MRM3Q9HC36 420 aaKnown RBP20.25■□□□□ 0.83
TMC6-213ENST00000589933 CHRAC1Q9NRG0 131 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 CDC23Q9UJX2 597 aa20.25■□□□□ 0.83
TMC6-213ENST00000589933 MDC1Q14676 2089 aaKnown RBP20.25■□□□□ 0.83
TMC6-213ENST00000589933 IQCF5A8MTL0 148 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 TCP11X1B4DZS4 312 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 DSCR3O14972 297 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 SRPX2O60687 465 aaPredicted RBP20.24■□□□□ 0.83
TMC6-213ENST00000589933 ETS1P14921 441 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 MMP11P24347 488 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 ITGA3P26006 1051 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 SOX8P57073 446 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 SEMA3AQ14563 771 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 OVCH1Q7RTY7 1134 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 FAM20CQ8IXL6 584 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 KRT222Q8N1A0 295 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 C2orf73Q8N5S3 287 aaPredicted RBP20.24■□□□□ 0.83
TMC6-213ENST00000589933 LINC01555Q8NAE3 123 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 CUTCQ9NTM9 273 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 PLEKHB1Q9UF11 243 aaPredicted RBP20.24■□□□□ 0.83
TMC6-213ENST00000589933 TTC7AQ9ULT0 858 aaPredicted RBP20.24■□□□□ 0.83
TMC6-213ENST00000589933 DRG1Q9Y295 367 aaKnown RBP20.24■□□□□ 0.83
TMC6-213ENST00000589933 ZKSCAN5Q9Y2L8 839 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 KLHL20Q9Y2M5 609 aa20.24■□□□□ 0.83
TMC6-213ENST00000589933 A0A0U1RQJ8 604 aa20.23■□□□□ 0.83
TMC6-213ENST00000589933 RPS3P23396 243 aaKnown RBP eCLIP20.23■□□□□ 0.83
TMC6-213ENST00000589933 PLEKHN1Q494U1 663 aaPredicted RBP20.23■□□□□ 0.83
TMC6-213ENST00000589933 PRR30Q53SZ7 412 aaPredicted RBP20.23■□□□□ 0.83
TMC6-213ENST00000589933 RNF187Q5TA31 235 aaPredicted RBP20.23■□□□□ 0.83
TMC6-213ENST00000589933 MRNIPQ6NTE8 343 aa20.23■□□□□ 0.83
TMC6-213ENST00000589933 PPP1R32Q7Z5V6 425 aa20.23■□□□□ 0.83
TMC6-213ENST00000589933 LDB1Q86U70 411 aaPredicted RBP20.23■□□□□ 0.83
TMC6-213ENST00000589933 COG1Q8WTW3 980 aa20.23■□□□□ 0.83
TMC6-213ENST00000589933 IL17FQ96PD4 163 aa20.23■□□□□ 0.83
TMC6-213ENST00000589933 ZNF552Q9H707 407 aaPredicted RBP20.23■□□□□ 0.83
TMC6-213ENST00000589933 USP9YO00507 2555 aaPredicted RBP20.23■□□□□ 0.83
TMC6-213ENST00000589933 H3BMM5 538 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 RPL22P35268 128 aaKnown RBP20.22■□□□□ 0.83
TMC6-213ENST00000589933 GRIA3P42263 894 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 EIF3BP55884 814 aaKnown RBP20.22■□□□□ 0.83
TMC6-213ENST00000589933 SARNPP82979 210 aaKnown RBP20.22■□□□□ 0.83
TMC6-213ENST00000589933 EIF2S3LQ2VIR3 472 aaKnown RBP20.22■□□□□ 0.83
TMC6-213ENST00000589933 DRICH1Q6PGQ1 229 aaPredicted RBP20.22■□□□□ 0.83
TMC6-213ENST00000589933 LKAAEAR1Q8TD35 194 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 MENTQ9BUN1 341 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 AGPAT4Q9NRZ5 378 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 CIDEBQ9UHD4 219 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 PCSK5Q92824 1860 aa20.22■□□□□ 0.83
TMC6-213ENST00000589933 SPTAN1Q13813 2472 aaKnown RBP20.21■□□□□ 0.83
TMC6-213ENST00000589933 ONECUT2O95948 504 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 CTSBP07858 339 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 UMODP07911 640 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 GLRBP48167 497 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 CDK16Q00536 496 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 RBBP7Q16576 425 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 MEI1Q5TIA1 1274 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 PRAMEF13Q5VWM6 474 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 PRUNE1Q86TP1 453 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 CISD2Q8N5K1 135 aaKnown RBP20.21■□□□□ 0.83
TMC6-213ENST00000589933 LMNTD1Q8N9Z9 388 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 SNRNP40Q96DI7 357 aaKnown RBP20.21■□□□□ 0.83
TMC6-213ENST00000589933 P2RY12Q9H244 342 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 SLC26A1Q9H2B4 701 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 SEMA3GQ9NS98 782 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 HOMER3Q9NSC5 361 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 TREX1Q9NSU2 369 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 MARCH4Q9P2E8 410 aaPredicted RBP20.21■□□□□ 0.83
TMC6-213ENST00000589933 FBXL4Q9UKA2 621 aa20.21■□□□□ 0.83
TMC6-213ENST00000589933 COPG1Q9Y678 874 aaKnown RBP20.21■□□□□ 0.83
TMC6-213ENST00000589933 CNTRLQ7Z7A1 2325 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 CNOT3O75175 753 aaKnown RBP20.2■□□□□ 0.82
TMC6-213ENST00000589933 SEMA7AO75326 666 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 C1orf105O95561 183 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 ERVK-10P10266 1014 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 PAMP19021 973 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 OCA2Q04671 838 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 MRPL49Q13405 166 aaKnown RBP20.2■□□□□ 0.82
TMC6-213ENST00000589933 GRB7Q14451 532 aa20.2■□□□□ 0.82
TMC6-213ENST00000589933 NKG7Q16617 165 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms