RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CRLF1O75462 422 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 OR2B3O76000 313 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 HPP00738 406 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 RAF1P04049 648 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 ABOP16442 354 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 ERCC2P18074 760 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 HLA-DPA1P20036 260 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 PRDX3P30048 256 aaKnown RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 CHRNB4P30926 498 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 HSPA9P38646 679 aaKnown RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 HALP42357 657 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 TNNT3P45378 269 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 HCAR3P49019 387 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 ARSEP51690 589 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 EPHB1P54762 984 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 TAS2R40P59535 323 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 PPP2R2BQ00005 443 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 OLIG2Q13516 323 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 SNTB1Q13884 538 aaKnown RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 LONRF2Q1L5Z9 754 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 KRTCAP3Q53RY4 240 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 ALS2CLQ60I27 953 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 HIBCHQ6NVY1 386 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 CEP128Q6ZU80 1094 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 RFX8Q6ZV50 586 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 OVCH1Q7RTY7 1134 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 LRRC49Q8IUZ0 686 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 TAB3Q8N5C8 712 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 ZNF655Q8N720 491 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 P3H4Q92791 437 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 FKBP10Q96AY3 582 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 C8orf44Q96CB5 159 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 LRRC45Q96CN5 670 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 FRMD6Q96NE9 622 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 RUNDC3BQ96NL0 473 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 OSBPL9Q96SU4 736 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 INSM2Q96T92 566 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 SPATA16Q9BXB7 569 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 TDRD1Q9BXT4 1180 aaKnown RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 HES7Q9BYE0 225 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 FRMD8P1Q9BZ68 369 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 OSBPL8Q9BZF1 889 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 RNF32Q9H0A6 362 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 SLC26A1Q9H2B4 701 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 SOX17Q9H6I2 414 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 WDR54Q9H977 334 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 MRM3Q9HC36 420 aaKnown RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 PCDH18Q9HCL0 1135 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 FEZ2Q9UHY8 353 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 SNX12Q9UMY4 172 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 NPIPA1Q9UND3 350 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 PACSIN2Q9UNF0 486 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 CHKBQ9Y259 395 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 MRPS2Q9Y399 296 aaKnown RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 AP1M2Q9Y6Q5 423 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 MPDZO75970 2070 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 hCG_1818297A0A087WSY0 165 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 GSAPA4D1B5 854 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 ASPDHA6ND91 283 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 OR5H15A6NDH6 313 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 APOC4-APOC2K7ER74 178 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 BTN3A3O00478 584 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 BTN3A1O00481 513 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 ASNA1O43681 348 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 CST8O60676 142 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 USP1O94782 785 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 CDK14O94921 469 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 TSPAN12O95859 305 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 ONECUT2O95948 504 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 APOC2P02655 101 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 FGGP02679 453 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 COX6A1P12074 109 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 IL1R2P27930 398 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 PTPN7P35236 360 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 NR2C2P49116 596 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 DCDC1P59894 354 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 DYNLT1P63172 113 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 DPYSL3Q14195 570 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 NFE2L1Q14494 772 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 PDK1Q15118 436 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 RBBP7Q16576 425 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 WHAMMP3Q1A5X7 153 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 ANKRD20A8PQ5CZ79 823 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 RNFT1Q5M7Z0 435 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 TIGD7Q6NT04 549 aaPredicted RBP5.82□□□□□ -1.48
VPS25-204ENST00000589577 ARMC6Q6NXE6 501 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 NAPRTQ6XQN6 538 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 CYP4V2Q6ZWL3 525 aaPredicted RBP5.82□□□□□ -1.48
VPS25-204ENST00000589577 TRAPPC5Q8IUR0 188 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 CCDC71Q8IV32 467 aaPredicted RBP5.82□□□□□ -1.48
VPS25-204ENST00000589577 CDKL3Q8IVW4 592 aaPredicted RBP5.82□□□□□ -1.48
VPS25-204ENST00000589577 KBTBD2Q8IY47 623 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 GPR135Q8IZ08 494 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 DTWD1Q8N5C7 304 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 ATPAF2Q8N5M1 289 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 CEP112Q8N8E3 955 aa5.82□□□□□ -1.48
VPS25-204ENST00000589577 CCNYQ8ND76 341 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms