RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ISXQ2M1V0 245 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 KRT71Q3SY84 523 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 ZNF574Q6ZN55 896 aaPredicted RBP18.93■□□□□ 0.62
CIRBP-220ENST00000588917 SPNS2Q8IVW8 549 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 CYP4X1Q8N118 509 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 CHCHD4Q8N4Q1 142 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 DENND1AQ8TEH3 1009 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 ZNF480Q8WV37 535 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 FBXL8Q96CD0 374 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 ZIM3Q96PE6 472 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 RUFY1Q96T51 708 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 EGFL8Q99944 293 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 PCBD2Q9H0N5 130 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 C1GALT1Q9NS00 363 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 ACTR10Q9NZ32 417 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 PCDHB11Q9Y5F2 797 aa18.93■□□□□ 0.62
CIRBP-220ENST00000588917 IGHV5-10-1A0A0J9YXX1 117 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 TLCD2A6NGC4 264 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 E7ENX8 843 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 HGSO14964 777 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 KERAO60938 352 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 CSO75390 466 aaKnown RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 RASSF9O75901 435 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 GUCA1CO95843 209 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 PYGBP11216 843 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 H2AFXP16104 143 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 CSF2RBP32927 897 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 IRF9Q00978 393 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 TAP2Q03519 686 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 ZNF844Q08AG5 666 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 DLG1Q12959 904 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 EIF3IQ13347 325 aaKnown RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 SF1Q15637 639 aaKnown RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 PHF19Q5T6S3 580 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 SULT1C3Q6IMI6 304 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 AGTRAPQ6RW13 159 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 CLEC14AQ86T13 490 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 KMT5CQ86Y97 462 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 SLITRK4Q8IW52 837 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 LINC01555Q8NAE3 123 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 IL17FQ96PD4 163 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 ALG9Q9H6U8 611 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 CNOT10Q9H9A5 744 aaKnown RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 INTS7Q9NVH2 962 aaKnown RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 UTP6Q9NYH9 597 aaKnown RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 SENP1Q9P0U3 644 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 STOX2Q9P2F5 926 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-220ENST00000588917 CIDEBQ9UHD4 219 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 IKZF3Q9UKT9 509 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 POMT2Q9UKY4 750 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 TMCO1Q9UM00 188 aa18.92■□□□□ 0.62
CIRBP-220ENST00000588917 ZFYVE26Q68DK2 2539 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 A0A1W2PPM1 405 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 RGS16O15492 202 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-220ENST00000588917 ANKRD34CP0C6C1 535 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 THRAP10827 490 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 CDH3P22223 829 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 IMPA1P29218 277 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 RPA3P35244 121 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-220ENST00000588917 TARDBPQ13148 414 aaKnown RBP eCLIP18.91■□□□□ 0.62
CIRBP-220ENST00000588917 CASP8Q14790 479 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 NAA25Q14CX7 972 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 OR4D1Q15615 310 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 SLC5A12Q1EHB4 618 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 CEP85LQ5SZL2 805 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 CACHD1Q5VU97 1274 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 SPESP1Q6UW49 350 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 FAM92BQ6ZTR7 304 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 HDXQ7Z353 690 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 PRSS42Q7Z5A4 293 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 ARHGAP22Q7Z5H3 698 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 PTERQ96BW5 349 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 SCYL1Q96KG9 808 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 GPR78Q96P69 363 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 OR2A14Q96R47 310 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 CMKLR1Q99788 373 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 MRPL57Q9BQC6 102 aaKnown RBP18.91■□□□□ 0.62
CIRBP-220ENST00000588917 UNKQ9C0B0 810 aaKnown RBP18.91■□□□□ 0.62
CIRBP-220ENST00000588917 STMN4Q9H169 189 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-220ENST00000588917 SEMA6CQ9H3T2 930 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 PCMTD2Q9NV79 361 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 CD274Q9NZQ7 290 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 SEMA5BQ9P283 1151 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 KLHL3Q9UH77 587 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 GRID1Q9ULK0 1009 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 DMXL2Q8TDJ6 3036 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 PKD1L2Q7Z442 2459 aa18.91■□□□□ 0.62
CIRBP-220ENST00000588917 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 GOLGA6L10A6NI86 522 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 PRICKLE3O43900 615 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 CCNDBP1O95273 360 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 MYZAPP0CAP1 466 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 UGT2B7P16662 529 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 KRT4P19013 534 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 CSTF2P33240 577 aaKnown RBP eCLIP18.9■□□□□ 0.621e-14■■□□□ 12.3
CIRBP-220ENST00000588917 GLRBP48167 497 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 ARL4DP49703 201 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 GFERP55789 205 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 SNAP47Q5SQN1 464 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 THEMIS2Q5TEJ8 643 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms