RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SLC32A1Q9H598 525 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 OXSMQ9NWU1 459 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 STK38LQ9Y2H1 464 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 U3KQA8 63 aa16.43■□□□□ 0.22
SCAMP4-211ENST00000588907 ASCC3Q8N3C0 2202 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PIPSLA2A3N6 862 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 OR5K3A6NET4 321 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 SH3BP5O60239 455 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 DLX3O60479 287 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 TRIM13O60858 407 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 CBFA2T3O75081 653 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 KATNA1O75449 491 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PROS1P07225 676 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 BPGMP07738 259 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 CHRM5P08912 532 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 CDK4P11802 303 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 SERPINB5P36952 375 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 SLC6A12P48065 614 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 SQSTM1Q13501 440 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PCLAFQ15004 111 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 GUSBP11Q6P575 273 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 MBOAT1Q6ZNC8 495 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 SPRED1Q7Z699 444 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 HOMEZQ8IX15 550 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 CARFQ8N187 725 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 IFI44Q8TCB0 444 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PHF21BQ96EK2 531 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 L3HYPDHQ96EM0 354 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 MED8Q96G25 268 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 CD180Q99467 661 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 SGPP1Q9BX95 441 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 CD244Q9BZW8 370 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 TWSG1Q9GZX9 223 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 GPRC5BQ9NZH0 403 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 OPTCQ9UBM4 332 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PLAGL1Q9UM63 463 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PCDHB11Q9Y5F2 797 aa16.42■□□□□ 0.22
SCAMP4-211ENST00000588907 PRAMEF33A0A0G2JMD5 474 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 CPED1A4D0V7 1026 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 H3BQF6 201 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 K7EPI3 171 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 SNUPNO95149 360 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 IMPDH1P20839 514 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 SDHBP21912 280 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 HRH2P25021 359 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 OAS2P29728 719 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 ALDH4A1P30038 563 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 ABATP80404 500 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 NAE1Q13564 534 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 PTCHD3Q3KNS1 767 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 CFAP157Q5JU67 520 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 THEMIS2Q5TEJ8 643 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 PRAMEF13Q5VWM6 474 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 WDR74Q6RFH5 385 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 LCTLQ6UWM7 567 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 PIP4P1Q86T03 277 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 PLXDC1Q8IUK5 500 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 NUDCD3Q8IVD9 361 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 FAM76AQ8TAV0 307 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 RAB3IL1Q8TBN0 382 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 ZDHHC12Q96GR4 267 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 MAGEB10Q96LZ2 347 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 TRMOQ9BU70 441 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 TBC1D10AQ9BXI6 508 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 DNAJC11Q9NVH1 559 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 HRASLS2Q9NWW9 162 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 EPHA6Q9UF33 1036 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 KCNE2Q9Y6J6 123 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 FAM186AA6NE01 2351 aa16.41■□□□□ 0.22
SCAMP4-211ENST00000588907 RIF1Q5UIP0 2472 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 IGHV1OR21-1A0A087WYE8 117 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 OR6C74A6NCV1 312 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 TAPBPO15533 448 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 GDF9O60383 454 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 WDR47O94967 919 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 RPS17P08708 135 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 NEFHP12036 1026 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 EPB42P16452 691 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 CSRP1P21291 193 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 KCNA4P22459 653 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 GRK2P25098 689 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 EEF1DP29692 281 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 HSPA7P48741 367 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 PPM1FP49593 454 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 E2F1Q01094 437 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 MPP2Q14168 576 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 GLRX5Q86SX6 157 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 C10orf107Q8IVU9 208 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 LRRC56Q8IYG6 542 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 ADGRF3Q8IZF5 1079 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 LINC01555Q8NAE3 123 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 PPP1R14CQ8TAE6 165 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 DYDC1Q8WWB3 177 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 IL17FQ96PD4 163 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 PAIP2Q9BPZ3 127 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms