RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 SLC9B1Q4ZJI4 515 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 C6orf10Q5SRN2 563 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TMTC4Q5T4D3 741 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 LIPMQ5VYY2 423 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 REP15Q6BDI9 236 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ANKRD26P1Q6NSI1 321 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 C8orf82Q6P1X6 216 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 TTC33Q6PID6 262 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZNF773Q6PK81 442 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SLC2A7Q6PXP3 512 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ABRAXAS1Q6UWZ7 409 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SERPINA13PQ6UXR4 307 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZYG11AQ6WRX3 759 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZPBP2Q6X784 338 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZNF517Q6ZMY9 492 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 CYP4V2Q6ZWL3 525 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 LRRTM3Q86VH5 581 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZBTB8OSQ8IWT0 167 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 AQP12AQ8IXF9 295 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PELI3Q8N2H9 469 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZNF786Q8N393 782 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PARP8Q8N3A8 854 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ARFGAP1Q8N6T3 406 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PLD5Q8N7P1 536 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZNF366Q8N895 744 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ATP6V0D2Q8N8Y2 350 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SNX31Q8N9S9 440 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 OR13F1Q8NGS4 319 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 OR2T34Q8NGX1 318 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 DNAJB8Q8NHS0 232 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 JOSD2Q8TAC2 188 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SPPL2BQ8TCT7 592 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 GPBAR1Q8TDU6 330 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 S100ZQ8WXG8 99 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SORCS1Q8WY21 1168 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.07□□□□□ -1.76
LIG3-211ENST00000588713 ATP6V1E2Q96A05 226 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TMIGD2Q96BF3 282 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TAMM41Q96BW9 452 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ROPN1LQ96C74 230 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ARSGQ96EG1 525 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CERS2Q96G23 380 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ANKRD36BP1Q96IX9 119 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 FEM1CQ96JP0 617 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SLC45A3Q96JT2 553 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 MAELQ96JY0 434 aaKnown RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 TSNARE1Q96NA8 513 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 LENG8Q96PV6 779 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 OR52B2Q96RD2 323 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PEBP4Q96S96 227 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CDRT15Q96T59 188 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CCDC3Q9BQI4 270 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CNPY3Q9BT09 278 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 DCUN1D5Q9BTE7 237 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 KIFC3Q9BVG8 833 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 DUSP23Q9BVJ7 150 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CALN1Q9BXU9 219 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SHCBP1LQ9BZQ2 653 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ZCCHC2Q9C0B9 1178 aaKnown RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 DNAI2Q9GZS0 605 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 ILKAPQ9H0C8 392 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 RNF38Q9H0F5 515 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 POLR3FQ9H1D9 316 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 RMND5AQ9H871 391 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 COQ10BQ9H8M1 238 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 GPN2Q9H9Y4 310 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 LIN28AQ9H9Z2 209 aaKnown RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 MOV10Q9HCE1 1003 aaKnown RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 CYP4F12Q9HCS2 524 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 HMG20AQ9NP66 347 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 SPAG4Q9NPE6 437 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CISHQ9NSE2 258 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 RIC8BQ9NVN3 520 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 NSMCE4AQ9NXX6 385 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TXNDC16Q9P2K2 825 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 THAP10Q9P2Z0 257 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 KLHL3Q9UH77 587 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TLK1Q9UKI8 766 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PNMA8BQ9ULN7 279 aaPredicted RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 CDC14AQ9UNH5 594 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 DOLKQ9UPQ8 538 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 CA5BQ9Y2D0 317 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 TSC22D4Q9Y3Q8 395 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PCDHB5Q9Y5E4 795 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 PCDHGC4Q9Y5F7 938 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 HEY1Q9Y5J3 304 aa4.07□□□□□ -1.76
LIG3-211ENST00000588713 OAS3Q9Y6K5 1087 aaKnown RBP4.07□□□□□ -1.76
LIG3-211ENST00000588713 ARID1BQ8NFD5 2236 aaPredicted RBP4.06□□□□□ -1.76
LIG3-211ENST00000588713 MYOFQ9NZM1 2061 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 A0A1W2PPW3 197 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 TCAF2A6NFQ2 919 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 C2CD4BA6NLJ0 364 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 CLDN25C9JDP6 229 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 G3V2L1 256 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 H0YAE9 185 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 SLC22A1O15245 554 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 XPOTO43592 962 aaKnown RBP4.06□□□□□ -1.76
LIG3-211ENST00000588713 PRPSAP2O60256 369 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 CACNG3O60359 315 aa4.06□□□□□ -1.76
LIG3-211ENST00000588713 AVILO75366 819 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms