RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 ZC3H7BQ9UGR2 993 aaKnown RBP16.53■□□□□ 0.24
RFX1-202ENST00000586913 PLCL2Q9UPR0 1127 aa16.53■□□□□ 0.24
RFX1-202ENST00000586913 ARHGEF33A8MVX0 844 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 PRB1P04280 392 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 MAGP20916 626 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 GABRB3P28472 473 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 PTPN4P29074 926 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 CCR10P46092 362 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 RPL21P46778 160 aaKnown RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 RPS15P62841 145 aaKnown RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 PRAMEF17Q5VTA0 474 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 TLDC1Q6P9B6 456 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 CYHR1Q6ZMK1 362 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 ZNF843Q8N446 348 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 ASB11Q8WXH4 323 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 MR1Q95460 341 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 CLIP3Q96DZ5 547 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 RNF31Q96EP0 1072 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 GPR21Q99679 349 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 WDR83Q9BRX9 315 aaKnown RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 ERP44Q9BS26 406 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 GEMIN8Q9NWZ8 242 aaKnown RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 CIDEBQ9UHD4 219 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 TUBD1Q9UJT1 453 aa16.52■□□□□ 0.24
RFX1-202ENST00000586913 CORO1CQ9ULV4 474 aaPredicted RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 MRPS18BQ9Y676 258 aaKnown RBP16.52■□□□□ 0.24
RFX1-202ENST00000586913 A0A1W2PPV9 198 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ZNF839A8K0R7 811 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 GFYI3L273 518 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ZNF749O43361 778 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 HCRTR1O43613 425 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 KATNA1O75449 491 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 OR2B3O76000 313 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 AHSGP02765 367 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 F7P08709 466 aaPredicted RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 CARSP49589 748 aaKnown RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 NAA25Q14CX7 972 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ZC3H12BQ5HYM0 836 aaKnown RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 TEDDM1Q5T9Z0 273 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ZNF385CQ66K41 422 aaPredicted RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 RHBDD2Q6NTF9 364 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 FAM199XQ6PEV8 388 aaPredicted RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 FIGLAQ6QHK4 219 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ZNF572Q7Z3I7 529 aaPredicted RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 SYVN1Q86TM6 617 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 C2orf73Q8N5S3 287 aaPredicted RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 OR2A1Q8NGT9 310 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 PROKR1Q8TCW9 393 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 SMPDL3AQ92484 453 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 PWWP2AQ96N64 755 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 NLNQ9BYT8 704 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 TRIM31Q9BZY9 425 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 SEMA4CQ9C0C4 833 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 SLC7A5P2Q9GIP4 190 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 CHST8Q9H2A9 424 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ACTL8Q9H568 366 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 EURLQ9NYK6 297 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 TAS2R13Q9NYV9 303 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 WHRNQ9P202 907 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 SRPK3Q9UPE1 567 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 CHMP2BQ9UQN3 213 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 FARSAQ9Y285 508 aaKnown RBP16.51■□□□□ 0.23
RFX1-202ENST00000586913 SNX24Q9Y343 169 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 SPTBP11277 2137 aa16.51■□□□□ 0.23
RFX1-202ENST00000586913 ZSCAN9O15535 394 aaPredicted RBP16.5■□□□□ 0.23
RFX1-202ENST00000586913 ZBTB14O43829 449 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 PRKAR1AP10644 381 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.23
RFX1-202ENST00000586913 CUL1Q13616 776 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 DEFB110Q30KQ9 67 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 FCRL6Q6DN72 434 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 C16orf46Q6P387 395 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 TAX1BP1Q86VP1 789 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 FAM20CQ8IXL6 584 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 SYTL1Q8IYJ3 562 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 OR2L3Q8NG85 312 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 APOBEC4Q8WW27 367 aaKnown RBP16.5■□□□□ 0.23
RFX1-202ENST00000586913 C17orf62Q9BQA9 187 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 TRMT6Q9UJA5 497 aaKnown RBP16.5■□□□□ 0.23
RFX1-202ENST00000586913 POLHQ9Y253 713 aa16.5■□□□□ 0.23
RFX1-202ENST00000586913 SMG1Q96Q15 3661 aaKnown RBP16.5■□□□□ 0.23
RFX1-202ENST00000586913 SEC16AO15027 2179 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 RAD51CO43502 376 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 CAPN1P07384 714 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 FAM87AP0C7U9 286 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 AGXTP21549 392 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 GRIA3P42263 894 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 GCGRP47871 477 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 RGS4P49798 205 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 POLE2P56282 527 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 PDIA2Q13087 525 aaKnown RBP16.49■□□□□ 0.23
RFX1-202ENST00000586913 CALCOCO2Q13137 446 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 ERV3-1Q14264 604 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 UGT8Q16880 541 aa16.49■□□□□ 0.23
RFX1-202ENST00000586913 HP1BP3Q5SSJ5 553 aaPredicted RBP16.49■□□□□ 0.23
RFX1-202ENST00000586913 YOD1Q5VVQ6 348 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms