RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 PCDHB1Q9Y5F3 818 aa4.67□□□□□ -1.66
ZNF540-204ENST00000586792 BZW2Q9Y6E2 419 aaKnown RBP4.67□□□□□ -1.66
ZNF540-204ENST00000586792 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.67□□□□□ -1.66
ZNF540-204ENST00000586792 AP1M2Q9Y6Q5 423 aa4.67□□□□□ -1.66
ZNF540-204ENST00000586792 MUC22E2RYF6 1773 aaPredicted RBP4.67□□□□□ -1.66
ZNF540-204ENST00000586792 MUC6Q6W4X9 2439 aa4.67□□□□□ -1.66
ZNF540-204ENST00000586792 ATXN2Q99700 1313 aaKnown RBP4.67□□□□□ -1.66
ZNF540-204ENST00000586792 NYNRINQ9P2P1 1898 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 USP34Q70CQ2 3546 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CCDC187A0A096LP49 1063 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 IGHV1OR15-9A0A0B4J2B8 117 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 A0A1W2PPL8 197 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 BCLAF3A2AJT9 711 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TARSL2A2RTX5 802 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ANTXRLA6NF34 631 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 FAM47DPA6NHR8 397 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 LRRC72A6NJI9 287 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 C2CD4BA6NLJ0 364 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 SIGLEC16A6NMB1 481 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CYSRT1A8MQ03 144 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 BOLA2-SMG1P6H3BVE0 249 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PPP6CO00743 305 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PRPSAP2O60256 369 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 KDM1AO60341 852 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 RTN2O75298 545 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PTP4A3O75365 173 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 SEMA4FO95754 770 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TOP3BO95985 862 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 IL1BP01584 269 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 SERPING1P05155 500 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ZNF806P0C7X5 589 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 BCKDHBP21953 392 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PSMA2P25787 234 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 RFC1P35251 1148 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PSMD8P48556 350 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 NUMBP49757 651 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 STK19P49842 368 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TPMTP51580 245 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CCR9P51686 369 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 GTF2A1P52655 376 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 AIF1P55008 147 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PER3P56645 1201 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 GSCP56915 257 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TPI1P60174 286 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 IRX1P78414 480 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 GFPT1Q06210 699 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ENPP2Q13822 863 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ELAVL3Q14576 367 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 SF3A2Q15428 464 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CST6Q15828 149 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 DUOXA1Q1HG43 343 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ZNF674Q2M3X9 581 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 C15orf59Q2T9L4 293 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 WSCD2Q2TBF2 565 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 HNRNPA1L2Q32P51 320 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 C2orf76Q3KRA6 126 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 FSCBQ5H9T9 825 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TMEM215Q68D42 235 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 SHQ1Q6PI26 577 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 APTXQ7Z2E3 356 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ZER1Q7Z7L7 766 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CPOQ8IVL8 374 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CEP97Q8IW35 865 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 MCOLN2Q8IZK6 566 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 APCDD1Q8J025 514 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TAGAPQ8N103 731 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 RYBPQ8N488 228 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 HDDC3Q8N4P3 179 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 DEFB119Q8N690 84 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 C10orf53Q8N6V4 93 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 DCAF4L2Q8NA75 395 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 Q8NA96 180 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CADM4Q8NFZ8 388 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 OR52K2Q8NGK3 314 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 JOSD2Q8TAC2 188 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 WFDC5Q8TCV5 224 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ANKRD49Q8WVL7 239 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 IGSF8Q969P0 613 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 NT5C3BQ969T7 300 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 NTAN1Q96AB6 310 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PPP1R16AQ96I34 528 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 VCPIP1Q96JH7 1222 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 RUNDC3BQ96NL0 473 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PCDHB18PQ96TA0 734 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PRMT1Q99873 361 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 FEM1AQ9BSK4 669 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 RTKNQ9BST9 563 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CNPY3Q9BT09 278 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 GTPBP2Q9BX10 602 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TMEM245Q9H330 911 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 NCOR1P1Q9H4R4 102 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CATSPERBQ9H7T0 1116 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 SGK2Q9HBY8 427 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 TMEM9BQ9NQ34 198 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CHCHD3Q9NX63 227 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 MPP6Q9NZW5 540 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 ZMAT5Q9UDW3 170 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 CNOT8Q9UFF9 292 aaKnown RBP4.66□□□□□ -1.66
ZNF540-204ENST00000586792 OR12D3Q9UGF7 316 aa4.66□□□□□ -1.66
ZNF540-204ENST00000586792 PCDHGB4Q9UN71 923 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms