RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 RPA4Q13156 261 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 RIPK1Q13546 671 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 GGTA1PQ4G0N0 100 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 PRAMEF9Q5VWM5 478 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 GCNT7Q6ZNI0 430 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 SNX31Q8N9S9 440 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 TMEM145Q8NBT3 493 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 ATL1Q8WXF7 558 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 HBEGFQ99075 208 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 SLC29A3Q9BZD2 475 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 ZDHHC5Q9C0B5 715 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 ZMYND15Q9H091 742 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 RASSF4Q9H2L5 321 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 RIC8BQ9NVN3 520 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 CIDEBQ9UHD4 219 aa19.85■□□□□ 0.77
ATG4D-204ENST00000586417 KCNE1BA0A087WTH5 132 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 PRR33A8MZF0 331 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 ACADVLP49748 655 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 AGKQ53H12 422 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 SPATA19Q7Z5L4 167 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 SFRP1Q8N474 314 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 OR9I1Q8NGQ6 314 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 GAB3Q8WWW8 586 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 RCN3Q96D15 328 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 PCED1AQ9H1Q7 454 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 ACTR8Q9H981 624 aa19.84■□□□□ 0.77
ATG4D-204ENST00000586417 INTS7Q9NVH2 962 aaKnown RBP19.84■□□□□ 0.77
ATG4D-204ENST00000586417 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.84■□□□□ 0.77
ATG4D-204ENST00000586417 PRAMEF26H0Y7S4 382 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 FFAR3O14843 346 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 GPR42O15529 346 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 AKT2P31751 481 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 MRPL19P49406 292 aaKnown RBP19.83■□□□□ 0.77
ATG4D-204ENST00000586417 RAP1GDS1P52306 607 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 DIO3P55073 304 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 C6orf136Q5SQH8 315 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 PAOXQ6QHF9 649 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 PDZD3Q86UT5 571 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 FUNDC1Q8IVP5 155 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 PARP9Q8IXQ6 854 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 L3MBTL4Q8NA19 623 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 DENND6BQ8NEG7 585 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 SPDYE1Q8NFV5 336 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-204ENST00000586417 OR56A3Q8NH54 315 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 USP7Q93009 1102 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 DUSP15Q9H1R2 295 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-204ENST00000586417 SDR39U1Q9NRG7 319 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-204ENST00000586417 FARSBQ9NSD9 589 aaKnown RBP19.83■□□□□ 0.77
ATG4D-204ENST00000586417 AIG1Q9NVV5 245 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 KLQ9UEF7 1012 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 GPR45Q9Y5Y3 372 aa19.83■□□□□ 0.77
ATG4D-204ENST00000586417 A0A088AWK7 358 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 MANBAO00462 879 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 FPGTO14772 594 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 AIM2O14862 343 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 LSM1O15116 133 aaKnown RBP19.83■□□□□ 0.76
ATG4D-204ENST00000586417 KMOO15229 486 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 CEACAM5P06731 702 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 EZRP15311 586 aaKnown RBP19.83■□□□□ 0.76
ATG4D-204ENST00000586417 STX1BP61266 288 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 ERVK-8P63133 956 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 IRX1P78414 480 aaPredicted RBP19.83■□□□□ 0.76
ATG4D-204ENST00000586417 NAE1Q13564 534 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 GSTA3Q16772 222 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 TPRG1LQ5T0D9 272 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 METRNLQ641Q3 311 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 UNC5DQ6UXZ4 953 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 THOC6Q86W42 341 aaKnown RBP19.83■□□□□ 0.76
ATG4D-204ENST00000586417 ARHGAP24Q8N264 748 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 CLPTM1LQ96KA5 538 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 SLC6A18Q96N87 628 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 THTPAQ9BU02 230 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 APOOQ9BUR5 198 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 CCDC167Q9P0B6 97 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 DMTF1Q9Y222 760 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 SLC17A4Q9Y2C5 497 aa19.83■□□□□ 0.76
ATG4D-204ENST00000586417 IDO1P14902 403 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 CD27P26842 260 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 NUDT2P50583 147 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 MAPRE2Q15555 327 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 KIF19Q2TAC6 998 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 ZNF528Q3MIS6 628 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 TRIM46Q7Z4K8 759 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 ULK2Q8IYT8 1036 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 ZNF480Q8WV37 535 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 OR4K3Q96R72 315 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 BRINP2Q9C0B6 783 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 MIR1-1HGQ9H1L0 117 aa19.82■□□□□ 0.76
ATG4D-204ENST00000586417 DENND2DQ9H6A0 471 aaPredicted RBP19.82■□□□□ 0.76
ATG4D-204ENST00000586417 ATP6V1G2O95670 118 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 DMPKQ09013 629 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 ATP6AP1LQ52LC2 224 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 LAYNQ6UX15 382 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 LPCAT2Q7L5N7 544 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 MYLK4Q86YV6 388 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-204ENST00000586417 SCUBE1Q8IWY4 988 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 MIER2Q8N344 545 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 KYQ8NBH2 561 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 PPFIBP2Q8ND30 876 aa19.81■□□□□ 0.76
ATG4D-204ENST00000586417 C1orf216Q8TAB5 229 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms