RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SP5Q6BEB4 398 aaPredicted RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 RPUSD3Q6P087 351 aaKnown RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 LINC00523Q86TU6 105 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 C2orf73Q8N5S3 287 aaPredicted RBP13.86□□□□□ -0.19
SDF2-202ENST00000585428 OR11G2Q8NGC1 345 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 OR52K1Q8NGK4 314 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 OR2L8Q8NGY9 312 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 SLC35B2Q8TB61 432 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 ASZ1Q8WWH4 475 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 ZNF778Q96MU6 729 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 TMEM121Q9BTD3 319 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 LACRTQ9GZZ8 138 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 SEMA3GQ9NS98 782 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 SLC2A6Q9UGQ3 507 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 OSGIN2Q9Y236 505 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 KLK4Q9Y5K2 254 aa13.86□□□□□ -0.19
SDF2-202ENST00000585428 CREBBPQ92793 2442 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 KLHL18O94889 574 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 GOT2P00505 430 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 STSP08842 583 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 MCM3P25205 808 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 AOAHP28039 575 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 TNFRSF8P28908 595 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 OR1D4P47884 311 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 CDC16Q13042 620 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 TLR1Q15399 786 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 SF1Q15637 639 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 P3H1Q32P28 736 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 ATG9BQ674R7 924 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 ZNF324BQ6AW86 544 aaPredicted RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 SHISA6Q6ZSJ9 500 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 ZNF534Q76KX8 674 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 CATSPER1Q8NEC5 780 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 THOC3Q96J01 351 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 IL17FQ96PD4 163 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 TTC1Q99614 292 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 SOX17Q9H6I2 414 aaPredicted RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 INTS7Q9NVH2 962 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 CTSFQ9UBX1 484 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 NXT1Q9UKK6 140 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 ENTPD4Q9Y227 616 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 R3HDM2Q9Y2K5 976 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 REXO2Q9Y3B8 237 aaKnown RBP13.85□□□□□ -0.19
SDF2-202ENST00000585428 FER1L5A0AVI2 2057 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 CCDC88CQ9P219 2028 aa13.85□□□□□ -0.19
SDF2-202ENST00000585428 IQCF5A8MTL0 148 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 F8W8V4 182 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 RASGRF2O14827 1237 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 CTSVO60911 334 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 SUN1O94901 812 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 FKBP9O95302 570 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 PRF1P14222 555 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 ADRA1DP25100 572 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 STIP1P31948 543 aaKnown RBP13.84□□□□□ -0.19
SDF2-202ENST00000585428 NAP1L1P55209 391 aaKnown RBP13.84□□□□□ -0.19
SDF2-202ENST00000585428 CDH17Q12864 832 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 SEMA3AQ14563 771 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 TUBB8Q3ZCM7 444 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 WASHC2DQ5SRD0 308 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 ISLR2Q6UXK2 745 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 UNC5DQ6UXZ4 953 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 DCUN1D3Q8IWE4 304 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 SRRM1Q8IYB3 904 aaKnown RBP13.84□□□□□ -0.19
SDF2-202ENST00000585428 DTWD1Q8N5C7 304 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 SLX1AQ9BQ83 275 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 MESP1Q9BRJ9 268 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 TSPY26PQ9H489 355 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 ETNK1Q9HBU6 452 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 CIDEBQ9UHD4 219 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 POLEQ07864 2286 aa13.84□□□□□ -0.19
SDF2-202ENST00000585428 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 HEATR9A2RTY3 570 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 HYKKA2RU49 373 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 GRID2IPA4D2P6 1211 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 GOLGA6L9A6NEM1 432 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 ERI2A8K979 691 aaKnown RBP13.83□□□□□ -0.2
SDF2-202ENST00000585428 HNRNPRO43390 633 aaKnown RBP13.83□□□□□ -0.2
SDF2-202ENST00000585428 MED26O95402 600 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 HPP00738 406 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 RPN2P04844 631 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 GRIA1P42261 906 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 PER3P56645 1201 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 KLC1Q07866 573 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 MFAP5Q13361 173 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.2
SDF2-202ENST00000585428 IRAK1BP1Q5VVH5 260 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 FBXO42Q6P3S6 717 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 AFTPHQ6ULP2 937 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 TAB3Q8N5C8 712 aaPredicted RBP13.83□□□□□ -0.2
SDF2-202ENST00000585428 DNAAF3Q8N9W5 541 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 CFAP61Q8NHU2 1237 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
SDF2-202ENST00000585428 PSMF1Q92530 271 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms