RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 RHBDD2Q6NTF9 364 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 MCATQ8IVS2 390 aaKnown RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 ZNF655Q8N720 491 aaPredicted RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 SLCO2A1Q92959 643 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 ZUFSPQ96AP4 578 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 SIGLEC10Q96LC7 697 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 TRIM56Q9BRZ2 755 aaKnown RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 NAT9Q9BTE0 207 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 MENTQ9BUN1 341 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 EURLQ9NYK6 297 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 TCFL5Q9UL49 500 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 SAR1BQ9Y6B6 198 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 FAM169AQ9Y6X4 670 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 TARM1B6A8C7 271 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 SMAPO00193 183 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 SUV39H1O43463 412 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 MATN4O95460 622 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 HSD17B2P37059 387 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 SLC1A2P43004 574 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 GABRA4P48169 554 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 ARSFP54793 590 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 NFKB2Q00653 900 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 GBX1Q14549 363 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 NCF4Q15080 339 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 HSP90AA5PQ58FG0 334 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 ACSBG2Q5FVE4 666 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 TCTE1Q5JU00 501 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 C1orf189Q5VU69 101 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 MLIPQ5VWP3 458 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 PAPD7Q5XG87 772 aaKnown RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 LCN10Q6JVE6 187 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 NEK10Q6ZWH5 1172 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 KCNMB4Q86W47 210 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 RAB43Q86YS6 212 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 APLFQ8IW19 511 aaPredicted RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 DENND6AQ8IWF6 608 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 FAM20CQ8IXL6 584 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 LMNTD1Q8N9Z9 388 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 OR9A1PQ8NGU1 263 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 HMGCLL1Q8TB92 370 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 KCNJ9Q92806 393 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 INPP5DQ92835 1189 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 ACSS2Q9NR19 701 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 IFT80Q9P2H3 777 aaPredicted RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 NDOR1Q9UHB4 597 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 FBXO5Q9UKT4 447 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
SS18-225ENST00000585121 KLHL20Q9Y2M5 609 aa11.91□□□□□ -0.5
SS18-225ENST00000585121 SEC16AO15027 2179 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 SPTBP11277 2137 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 BSNQ9UPA5 3926 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 USP27XA6NNY8 438 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 VPS26AO75436 327 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 CBSLP0DN79 551 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 PIM1P11309 404 aaPredicted RBP11.9□□□□□ -0.5
SS18-225ENST00000585121 ENO3P13929 434 aaPredicted RBP11.9□□□□□ -0.5
SS18-225ENST00000585121 ALAS2P22557 587 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 CMPK1P30085 196 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 CBSP35520 551 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 DR1Q01658 176 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 CRYMQ14894 314 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 MORF4L2Q15014 288 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 CYP2A13Q16696 494 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 BBS9Q3SYG4 887 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 SPANXN3Q5MJ09 141 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 TCTN3Q6NUS6 607 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 UGT3A1Q6NUS8 523 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 FAM198BQ6UWH4 519 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 PDIK1LQ8N165 341 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 TTC29Q8NA56 475 aaPredicted RBP11.9□□□□□ -0.5
SS18-225ENST00000585121 SMPDL3AQ92484 453 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 MIPEPQ99797 713 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 EBNA1BP2Q99848 306 aaKnown RBP11.9□□□□□ -0.5
SS18-225ENST00000585121 IARS2Q9NSE4 1012 aaKnown RBP11.9□□□□□ -0.5
SS18-225ENST00000585121 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 RNF14Q9UBS8 474 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 TLK1Q9UKI8 766 aa11.9□□□□□ -0.5
SS18-225ENST00000585121 ARGFXA6NJG6 315 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 ZBTB14O43829 449 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 PSIP1O75475 530 aaKnown RBP11.89□□□□□ -0.51
SS18-225ENST00000585121 CCNDBP1O95273 360 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 TUBB4AP04350 444 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 CAPN1P07384 714 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 MPC1LP0DKB6 136 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 RPA3P35244 121 aaPredicted RBP11.89□□□□□ -0.51
SS18-225ENST00000585121 GRIA3P42263 894 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 CLCN7P51798 805 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 RRADP55042 308 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
SS18-225ENST00000585121 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
SS18-225ENST00000585121 IL10RAQ13651 578 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 GRM7Q14831 915 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 ARHGAP19Q14CB8 494 aa11.89□□□□□ -0.51
SS18-225ENST00000585121 CCSMST1Q4G0I0 132 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms