RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SEMA6CQ9H3T2 930 aa13.42□□□□□ -0.26
TRAF4-215ENST00000584944 PRM3Q9NNZ6 103 aa13.42□□□□□ -0.26
TRAF4-215ENST00000584944 ACTR10Q9NZ32 417 aa13.42□□□□□ -0.26
TRAF4-215ENST00000584944 CD274Q9NZQ7 290 aa13.42□□□□□ -0.26
TRAF4-215ENST00000584944 ADAMTS6Q9UKP5 1117 aa13.42□□□□□ -0.26
TRAF4-215ENST00000584944 PDE10AQ9Y233 779 aa13.42□□□□□ -0.26
TRAF4-215ENST00000584944 CCDC187A0A096LP49 1063 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 SUPT3HB4E1H0 165 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CDC7O00311 574 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 HGSO14964 777 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 TOX3O15405 576 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 SUPT3HO75486 399 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CCNDBP1O95273 360 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 TSPAN12O95859 305 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 SLC16A8O95907 504 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 ALDOAP04075 364 aaKnown RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 NUDT17P0C025 328 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 SLC35E2BP0CK96 405 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CCND1P24385 295 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CSF2RBP32927 897 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 SEPHS1P49903 392 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 GFERP55789 205 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 TSNQ15631 228 aaKnown RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CDCP2Q5VXM1 449 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 SPESP1Q6UW49 350 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 RAB11FIP2Q7L804 512 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CARFQ8N187 725 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 RCBTB1Q8NDN9 531 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 MYRIPQ8NFW9 859 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 ANKRD49Q8WVL7 239 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 ROPN1BQ9BZX4 212 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 RAB33BQ9H082 229 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 ALG9Q9H6U8 611 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CNOT10Q9H9A5 744 aaKnown RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 ROPN1Q9HAT0 212 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 FANCEQ9HB96 536 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 CCDC177Q9NQR7 707 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 OGFRQ9NZT2 677 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 EPHA6Q9UF33 1036 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 NOVA2Q9UNW9 492 aaKnown RBP13.41□□□□□ -0.26
TRAF4-215ENST00000584944 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
TRAF4-215ENST00000584944 MN1Q10571 1320 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 NCF1BA6NI72 391 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 NCF1CA8MVU1 366 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 BTN3A3O00478 584 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 KLHL2O95198 593 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 MYZAPP0CAP1 466 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 THRAP10827 490 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 COL6A2P12110 1019 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 NCF1P14598 390 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 UGT2B7P16662 529 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 RBMS1P29558 406 aaKnown RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 CMPK1P30085 196 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 CCKBRP32239 447 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 GLRBP48167 497 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 HNMTP50135 292 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 HSD11B2P80365 405 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 ACAP2Q15057 778 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 PHKG1Q16816 387 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 C3orf38Q5JPI3 329 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 TMEM164Q5U3C3 297 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 TMEM207Q6UWW9 146 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 B3GNT8Q7Z7M8 397 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 ADGRF3Q8IZF5 1079 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 CACTIN-AS1Q8N1I8 211 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 OR2W6PQ8NHA6 318 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 WDR36Q8NI36 951 aaKnown RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 ACMSDQ8TDX5 336 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 NXPE2Q96DL1 559 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-215ENST00000584944 DHRS4Q9BTZ2 278 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 EPB41L4BQ9H329 900 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 IRAK4Q9NWZ3 460 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 WWOXQ9NZC7 414 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 TMEM9Q9P0T7 183 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 POMT2Q9UKY4 750 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 LOXL2Q9Y4K0 774 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 OARD1Q9Y530 152 aa13.4□□□□□ -0.26
TRAF4-215ENST00000584944 A0A0J9YY10 115 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 ZBTB11O95625 1053 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-215ENST00000584944 C9P02748 559 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 RBP1P09455 135 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 GFAPP14136 432 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 CD1DP15813 335 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 OAS2P29728 719 aaKnown RBP13.39□□□□□ -0.27
TRAF4-215ENST00000584944 CCT5P48643 541 aa13.39□□□□□ -0.27
TRAF4-215ENST00000584944 IRF9Q00978 393 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms