RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TTC23LQ6PF05 361 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 SYCE2Q6PIF2 218 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 DHDDSQ86SQ9 333 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 TMEM145Q8NBT3 493 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 OR4E2Q8NGC2 313 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 RP9Q8TA86 221 aaKnown RBP10.01□□□□□ -0.81
RFFL-212ENST00000584655 RDH11Q8TC12 318 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 FAM162AQ96A26 154 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 PRDM8Q9NQV8 689 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 ISM1B1AKI9 464 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 K7EPI3 171 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 NPHS1O60500 1241 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 OTCP00480 354 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 CYP2A7P20853 494 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 ACSL1P33121 698 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 P2RY2P41231 377 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 ACTR3P61158 418 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 HYAL1Q12794 435 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 HYAL2Q12891 473 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 ZXDCQ2QGD7 858 aaPredicted RBP10.01□□□□□ -0.81
RFFL-212ENST00000584655 CLIP3Q96DZ5 547 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 PHF12Q96QT6 1004 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 SLC6A13Q9NSD5 602 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 HS3ST2Q9Y278 367 aa10.01□□□□□ -0.81
RFFL-212ENST00000584655 MGAT4DA6NG13 374 aa10□□□□□ -0.81
RFFL-212ENST00000584655 hCG_2039718K7EN88 272 aa10□□□□□ -0.81
RFFL-212ENST00000584655 NME4O00746 187 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ATG13O75143 517 aa10□□□□□ -0.81
RFFL-212ENST00000584655 CSNK1DP48730 415 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ERVK-21P61565 698 aa10□□□□□ -0.81
RFFL-212ENST00000584655 RPS13P62277 151 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 CAMK2GQ13555 558 aaPredicted RBP10□□□□□ -0.81
RFFL-212ENST00000584655 TYSND1Q2T9J0 566 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ANKRD54Q6NXT1 300 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ZCCHC8Q6NZY4 707 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 CERS6Q6ZMG9 384 aa10□□□□□ -0.81
RFFL-212ENST00000584655 PRSS58Q8IYP2 241 aa10□□□□□ -0.81
RFFL-212ENST00000584655 CPSF7Q8N684 471 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 METTL27Q8N6F8 245 aaPredicted RBP10□□□□□ -0.81
RFFL-212ENST00000584655 ZCCHC10Q8TBK6 192 aa10□□□□□ -0.81
RFFL-212ENST00000584655 NEIL2Q969S2 332 aa10□□□□□ -0.81
RFFL-212ENST00000584655 RHBDF1Q96CC6 855 aa10□□□□□ -0.81
RFFL-212ENST00000584655 PRPF18Q99633 342 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 TMEM79Q9BSE2 394 aa10□□□□□ -0.81
RFFL-212ENST00000584655 SLC25A23Q9BV35 468 aa10□□□□□ -0.81
RFFL-212ENST00000584655 SPAG4Q9NPE6 437 aa10□□□□□ -0.81
RFFL-212ENST00000584655 PAPOLBQ9NRJ5 636 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 AASDHPPTQ9NRN7 309 aa10□□□□□ -0.81
RFFL-212ENST00000584655 CYP8B1Q9UNU6 501 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ARHGEF17Q96PE2 2063 aaPredicted RBP10□□□□□ -0.81
RFFL-212ENST00000584655 RNASEH1O60930 286 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 CATP04040 527 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 CDH1P12830 882 aa10□□□□□ -0.81
RFFL-212ENST00000584655 EPORP19235 508 aa10□□□□□ -0.81
RFFL-212ENST00000584655 FUT4P22083 530 aa10□□□□□ -0.81
RFFL-212ENST00000584655 SRSF5Q13243 272 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 PHYKPLQ8IUZ5 450 aa10□□□□□ -0.81
RFFL-212ENST00000584655 PANX1Q96RD7 426 aa10□□□□□ -0.81
RFFL-212ENST00000584655 RANBP9Q96S59 729 aa10□□□□□ -0.81
RFFL-212ENST00000584655 CCDC90BQ9GZT6 254 aa10□□□□□ -0.81
RFFL-212ENST00000584655 MRM3Q9HC36 420 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 C2orf42Q9NWW7 574 aa10□□□□□ -0.81
RFFL-212ENST00000584655 MKS1Q9NXB0 559 aa10□□□□□ -0.81
RFFL-212ENST00000584655 GPRC5BQ9NZH0 403 aa10□□□□□ -0.81
RFFL-212ENST00000584655 MAP4K5Q9Y4K4 846 aa10□□□□□ -0.81
RFFL-212ENST00000584655 DOCK4Q8N1I0 1966 aa10□□□□□ -0.81
RFFL-212ENST00000584655 GSAPA4D1B5 854 aa10□□□□□ -0.81
RFFL-212ENST00000584655 CLDN9O95484 217 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ZBTB11O95625 1053 aaPredicted RBP10□□□□□ -0.81
RFFL-212ENST00000584655 DNTTP04053 509 aa10□□□□□ -0.81
RFFL-212ENST00000584655 APODP05090 189 aa10□□□□□ -0.81
RFFL-212ENST00000584655 KLK1P06870 262 aa10□□□□□ -0.81
RFFL-212ENST00000584655 POU2F1P14859 743 aa10□□□□□ -0.81
RFFL-212ENST00000584655 DDX5P17844 614 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 DOC2AQ14183 400 aa10□□□□□ -0.81
RFFL-212ENST00000584655 MAP7Q14244 749 aa10□□□□□ -0.81
RFFL-212ENST00000584655 SLBPQ14493 270 aaKnown RBP eCLIP10□□□□□ -0.81
RFFL-212ENST00000584655 SQLEQ14534 574 aa10□□□□□ -0.81
RFFL-212ENST00000584655 C16orf72Q14CZ0 275 aa10□□□□□ -0.81
RFFL-212ENST00000584655 EEF1AKMT2Q5JPI9 291 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 KRT80Q6KB66 452 aa10□□□□□ -0.81
RFFL-212ENST00000584655 LARP4Q71RC2 724 aaKnown RBP eCLIP10□□□□□ -0.81
RFFL-212ENST00000584655 THOC6Q86W42 341 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 MEX3DQ86XN8 651 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 SHISA5Q8N114 240 aa10□□□□□ -0.81
RFFL-212ENST00000584655 RPLP0P6Q8NHW5 317 aa10□□□□□ -0.81
RFFL-212ENST00000584655 HERVK_113Q902F9 699 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ABTB1Q969K4 478 aaPredicted RBP10□□□□□ -0.81
RFFL-212ENST00000584655 MRGPRX3Q96LB0 322 aa10□□□□□ -0.81
RFFL-212ENST00000584655 TCF12Q99081 682 aa10□□□□□ -0.81
RFFL-212ENST00000584655 RTKNQ9BST9 563 aa10□□□□□ -0.81
RFFL-212ENST00000584655 CD244Q9BZW8 370 aa10□□□□□ -0.81
RFFL-212ENST00000584655 SPNS1Q9H2V7 528 aa10□□□□□ -0.81
RFFL-212ENST00000584655 ZNF576Q9H609 170 aa10□□□□□ -0.81
RFFL-212ENST00000584655 PRSS16Q9NQE7 514 aa10□□□□□ -0.81
RFFL-212ENST00000584655 EIF3LQ9Y262 564 aaKnown RBP10□□□□□ -0.81
RFFL-212ENST00000584655 PIAS3Q9Y6X2 628 aa10□□□□□ -0.81
RFFL-212ENST00000584655 LOC400499M0QZD8 3231 aa9.99□□□□□ -0.81
RFFL-212ENST00000584655 OR2W5A6NFC9 320 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms