RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 UBTD2Q8WUN7 234 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 DYDC1Q8WWB3 177 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SREK1Q8WXA9 508 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ESAMQ96AP7 390 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MOCOSQ96EN8 888 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 IL17FQ96PD4 163 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TMEM237Q96Q45 408 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 NRTNQ99748 197 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TMEM79Q9BSE2 394 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ERVK-6Q9BXR3 956 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CD244Q9BZW8 370 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ATG10Q9H0Y0 220 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 UCK1Q9HA47 277 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 WWOXQ9NZC7 414 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PCDHGB2Q9Y5G2 931 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ASCC3Q8N3C0 2202 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 IGF2RP11717 2491 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 LRRC14BA6NHZ5 514 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 E7ENX8 843 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 STK16O75716 305 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ALPPL2P10696 532 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 NEFHP12036 1026 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 EEF1DP29692 281 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PKLRP30613 574 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 GDF5P43026 501 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 HSPA7P48741 367 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 RAB28P51157 221 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 GUCY1A3Q02108 690 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 HHEXQ03014 270 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TAP2Q03519 686 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 NAE1Q13564 534 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FASTKQ14296 549 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 GPR18Q14330 331 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SUZ12Q15022 739 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PDK4Q16654 411 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PTCHD3Q3KNS1 767 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ANKS6Q68DC2 871 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TMEM26Q6ZUK4 368 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SLC35F3Q8IY50 421 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 RAB42Q8N4Z0 105 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ARL10Q8N8L6 244 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FAM181AQ8N9Y4 354 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 KYQ8NBH2 561 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 HMGCLL1Q8TB92 370 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 LCN9Q8WX39 176 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZNF75CPQ92670 426 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SH3KBP1Q96B97 665 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MAGEB18Q96M61 343 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TMEM121BQ9BXQ6 578 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 XKR8Q9H6D3 395 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MANSC1Q9H8J5 431 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TMEM9BQ9NQ34 198 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZMIZ1Q9ULJ6 1067 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ICKQ9UPZ9 632 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ASB1Q9Y576 335 aa15.84■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZNF839A8K0R7 811 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 H2AFYO75367 372 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SERPINE1P05121 402 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RPS17P08708 135 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NAA20P61599 178 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 STX3Q13277 289 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CES4AQ5XG92 561 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZCCHC8Q6NZY4 707 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZCCHC23Q6ZST2 131 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 AMIGO1Q86WK6 493 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SYTL1Q8IYJ3 562 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EID2Q8N6I1 236 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CCNYL1Q8N7R7 359 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LMNTD1Q8N9Z9 388 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PPFIBP2Q8ND30 876 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR4E2Q8NGC2 313 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR2L8Q8NGY9 312 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RAB3IL1Q8TBN0 382 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SETD7Q8WTS6 366 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 JPH3Q8WXH2 748 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CNDP1Q96KN2 507 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RAB11FIP5Q9BXF6 653 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SLC32A1Q9H598 525 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 STN1Q9H668 368 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ACSS2Q9NR19 701 aa15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 INTS7Q9NVH2 962 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-228ENST00000583363 WDFY3Q8IZQ1 3526 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 AKAP13Q12802 2813 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 K7EPI3 171 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 E2F3O00716 465 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 KLF11O14901 512 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SIGLEC6O43699 453 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NPHS1O60500 1241 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SUPT7LO94864 414 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CEACAM1P13688 526 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GRK2P25098 689 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SHMT2P34897 504 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CFAP157Q5JU67 520 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ATG16L1Q676U5 607 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CAPN13Q6MZZ7 669 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RGS9BPQ6ZS82 235 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 C2orf73Q8N5S3 287 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LINC01555Q8NAE3 123 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 KDF1Q8NAX2 398 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PPP1R14CQ8TAE6 165 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms