RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 UGT2B4P06133 528 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 CD6P30203 668 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 KRT6CP48668 564 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 EIF2B2P49770 351 aaKnown RBP13.35□□□□□ -0.27
RNF43-205ENST00000581868 FLT3LGP49771 235 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 CRHR2Q13324 411 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 OXA1LQ15070 435 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 CHRNA6Q15825 494 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 INAQ16352 499 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 GPRC6AQ5T6X5 926 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 ZCCHC8Q6NZY4 707 aaKnown RBP13.35□□□□□ -0.27
RNF43-205ENST00000581868 CHST9Q7L1S5 443 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 ZNF551Q7Z340 670 aaPredicted RBP13.35□□□□□ -0.27
RNF43-205ENST00000581868 SNX20Q7Z614 316 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 SKA2Q8WVK7 121 aaPredicted RBP13.35□□□□□ -0.27
RNF43-205ENST00000581868 PIH1D2Q8WWB5 315 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 UBE2FQ969M7 185 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 TNKS2Q9H2K2 1166 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 RMND5AQ9H871 391 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 RASSF1Q9NS23 344 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 TPRKBQ9Y3C4 175 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 C2orf78A6NCI8 922 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 RFXANKO14593 260 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 GABARAPO95166 117 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 PGLSO95336 258 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 MT-ND2P03891 347 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 RPS3P23396 243 aaKnown RBP eCLIP13.35□□□□□ -0.27
RNF43-205ENST00000581868 EPHA2P29317 976 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 ARHGDIAP52565 204 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 CLDN8P56748 225 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 NCS1P62166 190 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 IL18R1Q13478 541 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 SMU1Q2TAY7 513 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 OR4F3Q6IEY1 312 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 P2RY8Q86VZ1 359 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 SETD9Q8NE22 299 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 USP7Q93009 1102 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 MROQ9BYG7 248 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 ARL15Q9NXU5 204 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
RNF43-205ENST00000581868 PPT2Q9UMR5 302 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 AP3M1Q9Y2T2 418 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 TRIM17Q9Y577 477 aa13.35□□□□□ -0.27
RNF43-205ENST00000581868 SLC22A1O15245 554 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 DNAJB5O75953 348 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ITGAMP11215 1152 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ACRV1P26436 265 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 TGFBR1P36897 503 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 HALP42357 657 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 GBX1Q14549 363 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 DGUOKQ16854 277 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ZC3H12BQ5HYM0 836 aaKnown RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 LRIF1Q5T3J3 769 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 OR2T5Q6IEZ7 315 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 NCCRP1Q6ZVX7 275 aaPredicted RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 CHCHD4Q8N4Q1 142 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 OR2T29Q8NH02 315 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 PLD4Q96BZ4 506 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 PYCR2Q96C36 320 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 REXO5Q96IC2 774 aaKnown RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ELOVL6Q9H5J4 265 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ATP13A3Q9H7F0 1226 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 PDP1Q9P0J1 537 aaPredicted RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 VPS51Q9UID3 782 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 NUP214P35658 2090 aaPredicted RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 GLYATL1P3A0A0U1RQE8 302 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 SMAD6O43541 496 aaKnown RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 BMP4P12644 408 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 BPIP17213 487 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 HNF1BP35680 557 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 MASP1P48740 699 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 RPIAP49247 311 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ABHD18Q0P651 414 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 CLCA4Q14CN2 919 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ACOX1Q15067 660 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 MAPK11Q15759 364 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 GALNT13Q8IUC8 556 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 TTC29Q8NA56 475 aaPredicted RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 FBXO22Q8NEZ5 403 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ZNF566Q969W8 418 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 APOLD1Q96LR9 279 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 ATAD3AQ9NVI7 634 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 SAMD4AQ9UPU9 718 aaKnown RBP13.34□□□□□ -0.27
RNF43-205ENST00000581868 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
RNF43-205ENST00000581868 HTTP42858 3142 aa13.33□□□□□ -0.28
RNF43-205ENST00000581868 KRT87PA6NCN2 255 aa13.33□□□□□ -0.28
RNF43-205ENST00000581868 MANSC4A6NHS7 340 aaPredicted RBP13.33□□□□□ -0.28
RNF43-205ENST00000581868 M0QX08 132 aa13.33□□□□□ -0.28
RNF43-205ENST00000581868 WNT9AO14904 365 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms