RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TRPM8Q7Z2W7 1104 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 LILRA3Q8N6C8 439 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 ZFPM2Q8WW38 1151 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 CCDC74AQ96AQ1 378 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 NDNQ99608 321 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC38A3Q99624 504 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 EPB41L1Q9H4G0 881 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 MVB12BQ9H7P6 319 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 TMCO1Q9UM00 188 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 WDR37Q9Y2I8 494 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 DHRS7Q9Y394 339 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 RNF215Q9Y6U7 377 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 LILRA5A6NI73 299 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 CCT8L1PA6NM43 557 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 PHGDHO43175 533 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 BRINP1O60477 761 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 TRIM13O60858 407 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 F7P08709 466 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC35E2BP0CK96 405 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC19A1P41440 591 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 CLCN7P51798 805 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 ARFIP2P53365 341 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 EPHA4P54764 986 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 TAS2R39P59534 338 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 TLE3Q04726 772 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 BST1Q10588 318 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 NR1D2Q14995 579 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 CLCA4Q14CN2 919 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 RTP5Q14D33 572 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 PCLAFQ15004 111 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 ACAP2Q15057 778 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SPDYAQ5MJ70 313 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 XKR5Q6UX68 686 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 UNC5DQ6UXZ4 953 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 LRRC69Q6ZNQ3 347 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC22A9Q8IVM8 553 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 TFGQ92734 400 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 FAM136AQ96C01 138 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 GPR21Q99679 349 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SEMA4CQ9C0C4 833 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 CAB39LQ9H9S4 337 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 TMEM216Q9P0N5 145 aa13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 SCHIP1Q9P0W5 487 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 RUVBL2Q9Y230 463 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-220ENST00000581737 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 SMIM24O75264 130 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 ATP5HO75947 161 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 MYF5P13349 255 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 FDXRP22570 491 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 PDHA2P29803 388 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CSRP3P50461 194 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 ATP6V0D1P61421 351 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 GPLD1P80108 840 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CFHR1Q03591 330 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 GBX1Q14549 363 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CFAP157Q5JU67 520 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 RBM20Q5T481 1227 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 LIPMQ5VYY2 423 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 TTC23LQ6PF05 361 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 C6orf89Q6UWU4 347 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 NAPRTQ6XQN6 538 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 TMEM26Q6ZUK4 368 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 NEK10Q6ZWH5 1172 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 SPRED1Q7Z699 444 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 NKAPQ8N5F7 415 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 SIDT2Q8NBJ9 832 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 OR10G6Q8NH81 332 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 SNIP1Q8TAD8 396 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CD200R1Q8TD46 325 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 KCTD4Q8WVF5 259 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 ABCG4Q9H172 646 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 TRIT1Q9H3H1 467 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC40A1Q9NP59 571 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 KCNK4Q9NYG8 393 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 POLG2Q9UHN1 485 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 EMCNQ9ULC0 261 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 CDYLQ9Y232 598 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 ASF1AQ9Y294 204 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 MED16Q9Y2X0 877 aa13.1□□□□□ -0.31
CSNK1D-220ENST00000581737 UNC13CQ8NB66 2214 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 SLCO1B7G3V0H7 640 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 PPM1DO15297 605 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 RRP8O43159 456 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 DUX1O43812 170 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 SNNO75324 88 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms