RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 MRPS25P82663 173 aaKnown RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 PLOD1Q02809 727 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 TYSND1Q2T9J0 566 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 DEFB110Q30KQ9 67 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 ACSBG2Q5FVE4 666 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 AARS2Q5JTZ9 985 aaKnown RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 TBCELQ5QJ74 424 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 PAPD7Q5XG87 772 aaKnown RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 KIAA0930Q6ICG6 404 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 MRNIPQ6NTE8 343 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 OTOAQ7RTW8 1153 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 TMEM126BQ8IUX1 230 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 TMEM151BQ8IW70 566 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 GRK7Q8WTQ7 553 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 KIAA1143Q96AT1 154 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 SAMD15Q9P1V8 674 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 PCYOX1Q9UHG3 505 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 GNPTGQ9UJJ9 305 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 MAD1L1Q9Y6D9 718 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 PCSK5Q92824 1860 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 SPENQ96T58 3664 aaKnown RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CTAGE9A4FU28 777 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 H3BMH7 237 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 DNALI1O14645 258 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 PRICKLE3O43900 615 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CREG1O75629 220 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 C1orf105O95561 183 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CAPN1P07384 714 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 ERVK-10P10266 1014 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 PKMP14618 531 aaKnown RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 TCP1P17987 556 aaKnown RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CD9P21926 228 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 PKLRP30613 574 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 GMPRP36959 345 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 BDKRB1P46663 353 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 MPP1Q00013 466 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CDC20Q12834 499 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 NFATC3Q12968 1075 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 DNASE1L3Q13609 305 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 PTK6Q13882 451 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 FASTKQ14296 549 aaKnown RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 SWI5Q1ZZU3 235 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 HSP90AA5PQ58FG0 334 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 COLEC12Q5KU26 742 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 IZUMO3Q5VZ72 239 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 FCRL6Q6DN72 434 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 BORAQ6PGQ7 559 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CNSTQ6PJW8 725 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF605Q86T29 641 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 LRRC6Q86X45 466 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 PPIL6Q8IXY8 311 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 DSELQ8IZU8 1212 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CARFQ8N187 725 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 DNAJC22Q8N4W6 341 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 SKA2Q8WVK7 121 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 MR1Q95460 341 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CLIP3Q96DZ5 547 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 FCRL4Q96PJ5 515 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 PANX3Q96QZ0 392 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 TCF12Q99081 682 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 TRIM51Q9BSJ1 452 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 TSSK1BQ9BXA7 367 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 CHST8Q9H2A9 424 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 IARS2Q9NSE4 1012 aaKnown RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 C20orf96Q9NUD7 363 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 OR6C2Q9NZP2 312 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 ASIC3Q9UHC3 531 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 SERTAD3Q9UJW9 196 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF232Q9UNY5 417 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 FARSAQ9Y285 508 aaKnown RBP9.35□□□□□ -0.91
TOP3A-211ENST00000581536 MED16Q9Y2X0 877 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 SAR1BQ9Y6B6 198 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 FAM169AQ9Y6X4 670 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 TENM4Q6N022 2769 aa9.35□□□□□ -0.91
TOP3A-211ENST00000581536 A0A0J9YY10 115 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 GOLGA6L10A0A0M3HER8 536 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 B8ZZF3 427 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 F8W8V4 182 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 K7EM74 188 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 MATN2O00339 956 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 RASGRF2O14827 1237 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 KPNA5O15131 536 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 TTI1O43156 1089 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF749O43361 778 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 CPNE3O75131 537 aaKnown RBP9.34□□□□□ -0.91
TOP3A-211ENST00000581536 USP1O94782 785 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 MATN4O95460 622 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 ESR1P03372 595 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 MT-ND3P03897 115 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 CBSLP0DN79 551 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 PAMP19021 973 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 OGNP20774 298 aaKnown RBP9.34□□□□□ -0.91
TOP3A-211ENST00000581536 PSMB5P28074 263 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 GABRB3P28472 473 aa9.34□□□□□ -0.91
TOP3A-211ENST00000581536 RORAP35398 523 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms