RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 TMEM151BQ8IW70 566 aa20.45■□□□□ 0.86
CSNK1D-215ENST00000580784 TMEM102Q8N9M5 508 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-215ENST00000580784 DENND1AQ8TEH3 1009 aa20.45■□□□□ 0.86
CSNK1D-215ENST00000580784 C17orf62Q9BQA9 187 aa20.45■□□□□ 0.86
CSNK1D-215ENST00000580784 PTRH2Q9Y3E5 179 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-215ENST00000580784 PFDN6O15212 129 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 CNOT3O75175 753 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 ESR1P03372 595 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 CHRM3P20309 590 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 PSMB5P28074 263 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 GCGRP47871 477 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 ADARP55265 1226 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 SSPNQ14714 243 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 CYP1B1Q16678 543 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 PAPD7Q5XG87 772 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 CCDC137Q6PK04 289 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 TTLL10Q6ZVT0 673 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 RAB43Q86YS6 212 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 CILP2Q8IUL8 1156 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 FDCSPQ8NFU4 85 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 FOPNLQ96NB1 174 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 RAB11FIP5Q9BXF6 653 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 INTS7Q9NVH2 962 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 SAMD15Q9P1V8 674 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 NDOR1Q9UHB4 597 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 NEU2Q9Y3R4 380 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 MRFAP1Q9Y605 127 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 PTPN13Q12923 2485 aa20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 PRRC2CQ9Y520 2896 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-215ENST00000580784 FAM237BA0A1B0GVD1 139 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MAGEB16A2A368 324 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 SDR42E2A6NKP2 422 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 H3BMM5 538 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MATN4O95460 622 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 F7P08709 466 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MLNP12872 115 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 PAMP19021 973 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 OGNP20774 298 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MCM3P25205 808 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 CCNFP41002 786 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 FOLR3P41439 243 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 DHX34Q14147 1143 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 GBX1Q14549 363 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 NADK2Q4G0N4 442 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 ANKRD20A4Q4UJ75 823 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 ZC3H12BQ5HYM0 836 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 ARMC3Q5W041 872 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MRPL14Q6P1L8 145 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 REXO1L1PQ8IX06 675 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MCUQ8NE86 351 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 COG1Q8WTW3 980 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 ZUFSPQ96AP4 578 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MIB2Q96AX9 1013 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 ZNF669Q96BR6 464 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 MIPEPQ99797 713 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 NUDT9Q9BW91 350 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 SLC22A11Q9NSA0 550 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 DOPEY2Q9Y3R5 2298 aa20.43■□□□□ 0.86
CSNK1D-215ENST00000580784 RP1L1Q8IWN7 2480 aaPredicted RBP20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 CTSVO60911 334 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 PKMP14618 531 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 RRADP55042 308 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 FASTKQ14296 549 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 ACSBG2Q5FVE4 666 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 MRGPREQ86SM8 312 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 RAB42Q8N4Z0 105 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 OR2A1Q8NGT9 310 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 OR2Y1Q8NGV0 311 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 HMGCLL1Q8TB92 370 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 MAGEC3Q8TD91 643 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 DLG3Q92796 817 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 SERPINB12Q96P63 405 aa20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 XAB2Q9HCS7 855 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-215ENST00000580784 A0A1W2PPV9 198 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 TARM1B6A8C7 271 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 PGRMC1O00264 195 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 CD63P08962 238 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 ITGAXP20702 1163 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 ATP5DP30049 168 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 ARSFP54793 590 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 YBX1P67809 324 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 CTBP1Q13363 440 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 RAPSNQ13702 412 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 KLHL38Q2WGJ6 581 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 ZNF470Q6ECI4 717 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 SPNS2Q8IVW8 549 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 DENND6AQ8IWF6 608 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 AGGF1Q8N302 714 aaeCLIP20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 SLC35F6Q8N357 371 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 OR2L3Q8NG85 312 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 PTERQ96BW5 349 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 OSBPL9Q96SU4 736 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 NAP1L3Q99457 506 aaPredicted RBP20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 SLC30A3Q99726 388 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 SELENOSQ9BQE4 189 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 INTS10Q9NVR2 710 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 ZNF451Q9Y4E5 1061 aa20.41■□□□□ 0.86
CSNK1D-215ENST00000580784 ZCWPW2A0A1B0GU75 182 aa20.4■□□□□ 0.86
CSNK1D-215ENST00000580784 A0A1B0GX78 115 aa20.4■□□□□ 0.86
CSNK1D-215ENST00000580784 CTAGE9A4FU28 777 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms