RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 IL10RAQ13651 578 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 SEMA3AQ14563 771 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 DNAJC21Q5F1R6 531 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 PCID2Q5JVF3 399 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 PTRHD1Q6GMV3 140 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 UNC5AQ6ZN44 842 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 LDB1Q86U70 411 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 TAX1BP1Q86VP1 789 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 SYTL1Q8IYJ3 562 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ENDOVQ8N8Q3 282 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 SKA2Q8WVK7 121 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ARL8AQ96BM9 186 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ZBTB9Q96C00 473 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 PGM2Q96G03 612 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 PITPNM3Q9BZ71 974 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 EPN3Q9H201 632 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 CDC42EP4Q9H3Q1 356 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ACSS2Q9NR19 701 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 EIF2B3Q9NR50 452 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 CHRAC1Q9NRG0 131 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 BFARQ9NZS9 450 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 GNPTGQ9UJJ9 305 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ANAPC2Q9UJX6 822 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 ANKRD12Q6UB98 2062 aa9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 UBR5O95071 2799 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-216ENST00000574344 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ARGFXA6NJG6 315 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 IQCF5A8MTL0 148 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 AP3B1O00203 1094 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 MEN1O00255 615 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PRMT5O14744 637 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 RASGRF2O14827 1237 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 CD3EAPO15446 510 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ZNF749O43361 778 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 NDUFS3O75489 264 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 DNAJB5O75953 348 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 OR2B3O76000 313 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ACSL3O95573 720 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ABHD2P08910 425 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 HBQ1P09105 142 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 AGXTP21549 392 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PSMA3P25788 255 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ACADLP28330 430 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ARL4CP56559 192 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PPP2R2AP63151 447 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ACVR1Q04771 509 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 KLRB1Q12918 225 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 CHAF1BQ13112 559 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 HIF1AQ16665 826 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 UGT8Q16880 541 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PTCHD3Q3KNS1 767 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 CPZQ66K79 652 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 HIBCHQ6NVY1 386 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TTC23LQ6PF05 361 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 CDHR3Q6ZTQ4 885 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ASB18Q6ZVZ8 466 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ZNF534Q76KX8 674 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 RELL1Q8IUW5 271 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PPIL6Q8IXY8 311 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TEX19Q8NA77 164 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC38A9Q8NBW4 561 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 OR2W6PQ8NHA6 318 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 LKAAEAR1Q8TD35 194 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 ASZ1Q8WWH4 475 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 THAP4Q8WY91 577 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PEX13Q92968 403 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TCTN2Q96GX1 697 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 LRFN5Q96NI6 719 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PANX3Q96QZ0 392 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TMEM109Q9BVC6 243 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 IL22Q9GZX6 179 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TXLNGQ9NUQ3 528 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 SPHK1Q9NYA1 384 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 OR6C2Q9NZP2 312 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 TLK1Q9UKI8 766 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC39A10Q9ULF5 831 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 PADI2Q9Y2J8 665 aa9.33□□□□□ -0.92
NPLOC4-216ENST00000574344 MDC1Q14676 2089 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SMIM23A6NLE4 172 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 PFDN6O15212 129 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 EIF3HO15372 352 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■□□□□ 11
NPLOC4-216ENST00000574344 TTC4O95801 387 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 RECKO95980 971 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 RAB40ALP0C0E4 278 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 MSL3P1P0C860 447 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 MGAT1P26572 445 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 NMBRP28336 390 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 PKLRP30613 574 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 CCR7P32248 378 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 CASRP41180 1078 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 NPY2RP49146 381 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 RAB28P51157 221 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SARNPP82979 210 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms