RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 COQ9O75208 318 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 PDYNP01213 254 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ALDH2P05091 517 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 MZF1P28698 734 aaPredicted RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 ST13P50502 369 aaKnown RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 RPS3AP61247 264 aaKnown RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 GBX1Q14549 363 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 CLCA4Q14CN2 919 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 SYT6Q5T7P8 510 aaPredicted RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 LAIR1Q6GTX8 287 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 OR2T5Q6IEZ7 315 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 CAPN13Q6MZZ7 669 aaPredicted RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 SNX20Q7Z614 316 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 PAF1Q8N7H5 531 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 OR6K2Q8NGY2 324 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 OR2T29Q8NH02 315 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 UBTD2Q8WUN7 234 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ZNF641Q96N77 438 aaPredicted RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 TTLL2Q9BWV7 592 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ALOXE3Q9BYJ1 711 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ZFYVE1Q9HBF4 777 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 FBXO8Q9NRD0 319 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 GIN1Q9NXP7 522 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ZNF840PA6NDX5 716 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 BMP4P12644 408 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 ITGALP20701 1170 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 PTPN6P29350 595 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 CXCR4P61073 352 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 KEAP1Q14145 624 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 TMEM236Q5W0B7 351 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 MFSD4AQ8N468 514 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 SELENOMQ8WWX9 145 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 APOL4Q9BPW4 351 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 RHNO1Q9BSD3 238 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 SLC29A3Q9BZD2 475 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 ASPSCR1Q9BZE9 553 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 PCDH12Q9NPG4 1184 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 IL1RAPQ9NPH3 570 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 IL26Q9NPH9 171 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 PMF1-BGLAPU3KQ54 211 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 RFXANKO14593 260 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 DIRAS1O95057 198 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
NUP88-207ENST00000573584 FADS2O95864 444 aaKnown RBP15.24■□□□□ 0.03
NUP88-207ENST00000573584 MT-ND2P03891 347 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 CKBP12277 381 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 TACR1P25103 407 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 NCS1P62166 190 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 DNASE1L3Q13609 305 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 SMN1Q16637 294 aaKnown RBP15.24■□□□□ 0.03
NUP88-207ENST00000573584 KDM4DQ6B0I6 523 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 ZNF551Q7Z340 670 aaPredicted RBP15.24■□□□□ 0.03
NUP88-207ENST00000573584 MINDY2Q8NBR6 621 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 OR6Q1Q8NGQ2 317 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 PIH1D2Q8WWB5 315 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 PLD4Q96BZ4 506 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 MYO19Q96H55 970 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 ABHD8Q96I13 439 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 ZNF300Q96RE9 604 aaPredicted RBP15.24■□□□□ 0.03
NUP88-207ENST00000573584 GABARAPL1Q9H0R8 117 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 CWH43Q9H720 699 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 AASDHPPTQ9NRN7 309 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 HSPE1-MOB4S4R3N1 261 aa15.24■□□□□ 0.03
NUP88-207ENST00000573584 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 LRATO95237 230 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ACRV1P26436 265 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 MASP1P48740 699 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 NEK2P51955 445 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 SMARCB1Q12824 385 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 SLC14A1Q13336 389 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 INO80DQ53TQ3 878 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 METTL2BQ6P1Q9 378 aaKnown RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 SLC22A15Q8IZD6 547 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 CADM3Q8N126 398 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 TTC29Q8NA56 475 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 DYNC2LI1Q8TCX1 351 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ERLEC1Q96DZ1 483 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 TM6SF2Q9BZW4 377 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 TM9SF3Q9HD45 589 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 GPRC5BQ9NZH0 403 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 CRLS1Q9UJA2 301 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ZBBXA8MT70 800 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 hCG_2039718K7EN88 272 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 PGLSO95336 258 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ALOX5P09917 674 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 HIST2H2ACQ16777 129 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 ZCCHC8Q6NZY4 707 aaKnown RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 RASAL3Q86YV0 1011 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 BEND7Q8N7W2 519 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 WBP2Q969T9 261 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 TBC1D20Q96BZ9 403 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 MYOCQ99972 504 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ELOVL6Q9H5J4 265 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 RDH14Q9HBH5 336 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 PDP1Q9P0J1 537 aaPredicted RBP15.23■□□□□ 0.03
NUP88-207ENST00000573584 PPT2Q9UMR5 302 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 ERVW-1Q9UQF0 538 aa15.23■□□□□ 0.03
NUP88-207ENST00000573584 EVPLLA8MZ36 301 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms