RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SCUBE1Q8IWY4 988 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 SLC5A11Q8WWX8 675 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 EBPLQ9BY08 206 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 CD244Q9BZW8 370 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 WNT16Q9UBV4 365 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 C15orf38-AP3S2A0A0A6YYH1 394 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 CLDN4O14493 209 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ENTPD5O75356 428 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 KCNH1O95259 989 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 SERPINA6P08185 405 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 MMP2P08253 660 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 GRIA3P42263 894 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ASMTP46597 345 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ZXDBP98169 803 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 KRT80Q6KB66 452 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 CDHR3Q6ZTQ4 885 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ARPINQ7Z6K5 226 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 RABEPKQ7Z6M1 372 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 ZNF761Q86XN6 746 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 FAM160A2Q8N612 972 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 KIAA1958Q8N8K9 716 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 OR4F6Q8NGB9 312 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 RHEBL1Q8TAI7 183 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 DNAJB14Q8TBM8 379 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 CDRT15Q96T59 188 aa9.84□□□□□ -0.83
SMG6-213ENST00000573166 KCTD14Q9BQ13 255 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 RSPH9Q9H1X1 276 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 ZNF395Q9H8N7 513 aaPredicted RBP9.84□□□□□ -0.83
SMG6-213ENST00000573166 SRRM3A6NNA2 597 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 CHURC1-FNTBB4DL54 471 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 RFXANKO14593 260 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 DNAJC8O75937 253 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 PRLP01236 227 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 CDH1P12830 882 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 CRATP43155 626 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 KIR3DL1P43629 444 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 FNTBP49356 437 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ADPRHP54922 357 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 NFATC4Q14934 902 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 TECRLQ5HYJ1 363 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ZNF765Q7L2R6 523 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SPATA19Q7Z5L4 167 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 DCP2Q8IU60 420 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 EDAQ92838 391 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 USP7Q93009 1102 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 EXOSC8Q96B26 276 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 MIEF2Q96C03 454 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 PRDM8Q9NQV8 689 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 BATF3Q9NR55 127 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 C6orf203Q9P0P8 240 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 C15orf41Q9Y2V0 281 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 DGKBQ9Y6T7 804 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SCN5AQ14524 2016 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 EP300Q09472 2414 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ERI3O43414 337 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 ITM2AO43736 263 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 KIF1CO43896 1103 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 IFNA14P01570 189 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ZNHIT3Q15649 155 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 DEFB133Q30KQ1 61 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 AMIGO1Q86WK6 493 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 CD200R1Q8TD46 325 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ZDHHC1Q8WTX9 485 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ANKRD49Q8WVL7 239 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 FIG4Q92562 907 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 TRPV4Q9HBA0 871 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 MCM8Q9UJA3 840 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 OR10H1Q9Y4A9 318 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 PRSS38A1L453 326 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 C2orf74A8MZ97 194 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 C9JVG2 144 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 STX16-NPEPL1H3BU86 382 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 STX16O14662 325 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SLC16A5O15375 505 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 NDUFS4O43181 175 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 COX4I1P13073 169 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ATP6V1C1P21283 382 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SLC18A1P54219 525 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 CTBSQ01459 385 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 MEF2AQ02078 507 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 CHRNB3Q05901 458 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 RPA4Q13156 261 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 LSM12Q3MHD2 195 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 BHLHB9Q6PI77 547 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 UBE2Q1Q7Z7E8 422 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 PLD3Q8IV08 490 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 RASGEF1AQ8N9B8 481 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 CAMKVQ8NCB2 501 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 MCMBPQ9BTE3 642 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 NMUR2Q9GZQ4 415 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 CAAP1Q9H8G2 361 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ANKHQ9HCJ1 492 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SAR1AQ9NR31 198 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 VPS29Q9UBQ0 182 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 RUVBL1Q9Y265 456 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms