RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RASGRP3Q8IV61 690 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 RAB42Q8N4Z0 105 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 OR9A1PQ8NGU1 263 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 UHMK1Q8TAS1 419 aaKnown RBP15.27■□□□□ 0.04
CHD3-215ENST00000572750 DLG3Q92796 817 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 OR2A14Q96R47 310 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 OR6C1Q96RD1 312 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 PKP4Q99569 1192 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 ACSS3Q9H6R3 686 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 SPATA7Q9P0W8 599 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 PCDHGA7Q9Y5G6 932 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 B3GALT1Q9Y5Z6 326 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 GFYI3L273 518 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 PHGDHO43175 533 aaKnown RBP15.26■□□□□ 0.03
CHD3-215ENST00000572750 ERGP11308 486 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 FOLR1P15328 257 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 MAP4P27816 1152 aaKnown RBP15.26■□□□□ 0.03
CHD3-215ENST00000572750 SLC12A2P55011 1212 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 PCBP4P57723 403 aaKnown RBP15.26■□□□□ 0.03
CHD3-215ENST00000572750 RAB15P59190 212 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 HSD11B2P80365 405 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 MC2RQ01718 297 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 POU4F1Q01851 419 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 SP140Q13342 867 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 TUBB3Q13509 450 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 BMPR2Q13873 1038 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 USP10Q14694 798 aaKnown RBP15.26■□□□□ 0.03
CHD3-215ENST00000572750 KIR2DS3Q14952 304 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 PHKG1Q16816 387 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 GRTP1Q5TC63 336 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 CARFQ8N187 725 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 SNIP1Q8TAD8 396 aaKnown RBP15.26■□□□□ 0.03
CHD3-215ENST00000572750 FGF11Q92914 225 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
CHD3-215ENST00000572750 DCBLD2Q96PD2 775 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 TAAR9Q96RI9 348 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 CYTH2Q99418 400 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 DDA1Q9BW61 102 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 ANKZF1Q9H8Y5 726 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 GPAMQ9HCL2 828 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 C1GALT1Q9NS00 363 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 IKZF3Q9UKT9 509 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 FLNCQ14315 2725 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
CHD3-215ENST00000572750 A0A0J9YY10 115 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 NPEPPSL1A6NEC2 478 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 NVLO15381 856 aaKnown RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 ZBTB14O43829 449 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 SLU7O95391 586 aaKnown RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 SLC16A8O95907 504 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 C8GP07360 202 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 SPRP35270 261 aaPredicted RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 TSTA3Q13630 321 aaPredicted RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 GPR19Q15760 415 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 CYP2A13Q16696 494 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 DCAF12Q5T6F0 453 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 TMEM164Q5U3C3 297 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 KMT5CQ86Y97 462 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 FBXO15Q8NCQ5 510 aaPredicted RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 PPFIBP2Q8ND30 876 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 ZNF480Q8WV37 535 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 ANKRD49Q8WVL7 239 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 TRAPPC9Q96Q05 1148 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 FUT8Q9BYC5 575 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 UNKQ9C0B0 810 aaKnown RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 POPDC3Q9HBV1 291 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.25■□□□□ 0.03
CHD3-215ENST00000572750 LNPEPQ9UIQ6 1025 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 PDE10AQ9Y233 779 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 BTRCQ9Y297 605 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 KLHL20Q9Y2M5 609 aa15.25■□□□□ 0.03
CHD3-215ENST00000572750 V9GYY5 206 aaPredicted RBP15.25■□□□□ 0.03
CHD3-215ENST00000572750 BOD1L1Q8NFC6 3051 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 A0A1W2PPV9 198 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 POLR1CO15160 346 aaPredicted RBP15.24■□□□□ 0.03
CHD3-215ENST00000572750 WISP3O95389 354 aaPredicted RBP15.24■□□□□ 0.03
CHD3-215ENST00000572750 STMN1P16949 149 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 CYP2A7P20853 494 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 MAGP20916 626 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 TNFRSF8P28908 595 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 GMPRP36959 345 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 PNLIPRP1P54315 467 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 SRSF1Q07955 248 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHD3-215ENST00000572750 ILF2Q12905 390 aaKnown RBP15.24■□□□□ 0.03
CHD3-215ENST00000572750 ZKSCAN8Q15776 578 aaPredicted RBP15.24■□□□□ 0.03
CHD3-215ENST00000572750 ZIC1Q15915 447 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 SLC5A12Q1EHB4 618 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 DEFB110Q30KQ9 67 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 SUSD1Q6UWL2 747 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 CEACAM20Q6UY09 585 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 ZFAND4Q86XD8 727 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 SYTL1Q8IYJ3 562 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 D2HGDHQ8N465 521 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 C19orf47Q8N9M1 422 aaKnown RBP15.24■□□□□ 0.03
CHD3-215ENST00000572750 HMGCLL1Q8TB92 370 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 TSPAN17Q96FV3 270 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 PAFAH2Q99487 392 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 SLC12A9Q9BXP2 914 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms