RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RNF125Q96EQ8 232 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 PAGE5Q96GU1 130 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 KLHL15Q96M94 604 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 TRIM9Q9C026 710 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 ASB7Q9H672 318 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 UBE2ZQ9H832 354 aaPredicted RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 RPF1Q9H9Y2 349 aaKnown RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 UBTD1Q9HAC8 227 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 BRF2Q9HAW0 419 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 NOX4Q9NPH5 578 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 RMND1Q9NWS8 449 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 CGNQ9P2M7 1197 aaKnown RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 DNAJB4Q9UDY4 337 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 MALT1Q9UDY8 824 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SIX4Q9UIU6 781 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 ADAM28Q9UKQ2 775 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 UBQLN1Q9UMX0 589 aaKnown RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 PRG3Q9Y2Y8 225 aaPredicted RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 SNX9Q9Y5X1 595 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SCINQ9Y6U3 715 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 CDH23Q9H251 3354 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 UBE4BO95155 1302 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 RALGAPA2Q2PPJ7 1873 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 IGHV4OR15-8A0A075B7B6 117 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 A0A1B0GVL5 298 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 TMEM202A6NGA9 273 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CASTOR2A6NHX0 329 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ZNF233A6NK53 670 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 HIDE1A8MVS5 230 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 PRAC2D3DTV9 90 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 TMEM189-UBE2V1I3L0A0 370 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 SOCS6O14544 535 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 PTGESO14684 152 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 LDLRAD4O15165 306 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 MID1O15344 667 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 EIF3DO15371 548 aaKnown RBP eCLIP3.95□□□□□ -1.78
NUP88-202ENST00000570937 TIPRLO75663 272 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ZNF432O94892 652 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CSPG5O95196 566 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 SMC2O95347 1197 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 F9P00740 461 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 PYGLP06737 847 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 PFKFB1P16118 471 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CYP3A5P20815 502 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 MAOAP21397 527 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 DNAJB1P25685 340 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 TMEM132DQ14C87 1099 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 UPP1Q16831 310 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ZC2HC1CQ53FD0 456 aaPredicted RBP3.95□□□□□ -1.78
NUP88-202ENST00000570937 XKR4Q5GH76 650 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 PLPP4Q5VZY2 271 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ARMCX5Q6P1M9 558 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 UNQ6126/PRO20091Q6UXV3 157 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 TUBA1AQ71U36 451 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ADGRD2Q7Z7M1 963 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 EXOC3L1Q86VI1 746 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 METTL23Q86XA0 190 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CEP57Q86XR8 500 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 FOXRED2Q8IWF2 684 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CHERPQ8IWX8 916 aaKnown RBP3.95□□□□□ -1.78
NUP88-202ENST00000570937 ZBTB2Q8N680 514 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 SPATA22Q8NHS9 363 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ST8SIA4Q92187 359 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 KLHL29Q96CT2 875 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 C3orf30Q96M34 536 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 NECTIN4Q96NY8 510 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CSF3RQ99062 836 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 SH3GL2Q99962 352 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 TUBA1CQ9BQE3 449 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 STRA6Q9BX79 667 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 SPRY4Q9C004 299 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ZBP1Q9H171 429 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 KCNN2Q9H2S1 579 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 PCDH9Q9HC56 1237 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 BPIFA1Q9NP55 256 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CNGB3Q9NQW8 809 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 EXOC1Q9NV70 894 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 MIOSQ9NXC5 875 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 C1RLQ9NZP8 487 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 CHMP5Q9NZZ3 219 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 TBC1D7Q9P0N9 293 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 STYXL1Q9Y6J8 313 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 UNC80Q8N2C7 3258 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 SIP14410 1827 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 ARID2Q68CP9 1835 aa3.95□□□□□ -1.78
NUP88-202ENST00000570937 XIRP2A4UGR9 3374 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 GBF1Q92538 1859 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 FAM237AA0A1B0GTK4 181 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 TTC26A0AVF1 554 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 ANKRD63C9JTQ0 380 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 H3BQ06 376 aaPredicted RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 TEX28O15482 410 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 SEC14L5O43304 696 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 TNFSF14O43557 240 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 BUB3O43684 328 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 EXTL3O43909 919 aa3.94□□□□□ -1.78
NUP88-202ENST00000570937 KINO60870 393 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 RPN1P04843 607 aaKnown RBP3.94□□□□□ -1.78
NUP88-202ENST00000570937 EDN1P05305 212 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms