RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CASKO14936 926 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 TPST2O60704 377 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 PTTG1O95997 202 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 TGM1P22735 817 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 MYL9P24844 172 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ARNTP27540 789 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 NKX3-2P78367 333 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 SPDYE7PQ495Y7 208 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 PAMR1Q6UXH9 720 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 LINGO4Q6UY18 593 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 RANBP10Q6VN20 620 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 GDPD3Q7L5L3 318 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ZZZ3Q8IYH5 903 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 OR7D4Q8NG98 312 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 KIAA1191Q96A73 305 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ART5Q96L15 291 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 FRMD6Q96NE9 622 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 HOXD1Q9GZZ0 328 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 MFSD1Q9H3U5 465 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 IL1RAPQ9NPH3 570 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 FARSBQ9NSD9 589 aaKnown RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 TAS2R16Q9NYV7 291 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 SPO11Q9Y5K1 396 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 RRN3P2A6NIE6 340 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 MAFKO60675 156 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 EPHA2P29317 976 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 OR1G1P47890 313 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ERVPABLB-1P60509 514 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ALDH6A1Q02252 535 aaKnown RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 CAMK2GQ13555 558 aaPredicted RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 DSC3Q14574 896 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 UGT8Q16880 541 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 KCTD11Q693B1 232 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 MZT2BQ6NZ67 158 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 ZFAND4Q86XD8 727 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 NEDD4LQ96PU5 975 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 AARSD1Q9BTE6 412 aaKnown RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 UCK2Q9BZX2 261 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 MS4A12Q9NXJ0 267 aa10.66□□□□□ -0.7
PALB2-206ENST00000568219 FBXO9Q9UK97 447 aaPredicted RBP10.66□□□□□ -0.7
PALB2-206ENST00000568219 TRAV19A0A0A6YYK7 116 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 TARM1B6A8C7 271 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 F5H5T6 163 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 CLIC1O00299 241 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 OR2B3O76000 313 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SLITRK5O94991 958 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 CDRT1O95170 752 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 MATN4O95460 622 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SLC25A27O95847 323 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 RPS3P23396 243 aaKnown RBP eCLIP10.65□□□□□ -0.7
PALB2-206ENST00000568219 ACVRL1P37023 503 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 LIPAP38571 399 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 TTPAP49638 278 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 AIF1P55008 147 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 RPS14P62263 151 aaKnown RBP10.65□□□□□ -0.7
PALB2-206ENST00000568219 MVKQ03426 396 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 NPRL3Q12980 569 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 PLEKHM3Q6ZWE6 761 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 BBS7Q8IWZ6 715 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SH3RF2Q8TEC5 729 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 RNFT2Q96EX2 444 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 HSH2DQ96JZ2 352 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SERPINB11Q96P15 392 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 ALOXE3Q9BYJ1 711 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 AKIP1Q9NQ31 210 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 CRTAC1Q9NQ79 661 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 RAD18Q9NS91 495 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 NRCAMQ92823 1304 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 GPR39O43194 453 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 OR10H3O60404 316 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 GABARAPO95166 117 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SLC25A14O95258 325 aaPredicted RBP10.65□□□□□ -0.7
PALB2-206ENST00000568219 ENGP17813 658 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 LPOP22079 712 aaPredicted RBP10.65□□□□□ -0.7
PALB2-206ENST00000568219 ISL1P61371 349 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 C5orf22Q49AR2 442 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 FAAH2Q6GMR7 532 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 LETMD1Q6P1Q0 360 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 LBX2Q6XYB7 198 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 GOLM1Q8NBJ4 401 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 ISL2Q96A47 359 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 COPS8Q99627 209 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 MARCH2Q9P0N8 246 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 SLC13A4Q9UKG4 626 aa10.65□□□□□ -0.7
PALB2-206ENST00000568219 COL18A1P39060 1754 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 MEIOCA2RUB1 952 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 GSAPA4D1B5 854 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 TEX28O15482 410 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 SSX4O60224 188 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 SOX14O95416 240 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 FGF1P05230 155 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 IL6P05231 212 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 ZNF7P17097 686 aaPredicted RBP10.65□□□□□ -0.71
PALB2-206ENST00000568219 EIF2DP41214 584 aaKnown RBP10.65□□□□□ -0.71
PALB2-206ENST00000568219 GABARAPL2P60520 117 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 VGLL4Q14135 290 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 E2F2Q14209 437 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 GNASQ5JWF2 1037 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms