RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MMP11P24347 488 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 AOAHP28039 575 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 MRPL14Q6P1L8 145 aaKnown RBP17.88■□□□□ 0.45
LINC01238-205ENST00000567549 DRICH1Q6PGQ1 229 aaPredicted RBP17.88■□□□□ 0.45
LINC01238-205ENST00000567549 TTLL10Q6ZVT0 673 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 TMEM139Q8IV31 216 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 LRRC8AQ8IWT6 810 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 FLVCR1-AS1Q8TAF5 88 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 MFRPQ9BY79 579 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 AGPAT4Q9NRZ5 378 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 UTP6Q9NYH9 597 aaKnown RBP17.88■□□□□ 0.45
LINC01238-205ENST00000567549 SLC2A6Q9UGQ3 507 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 PLAGL1Q9UM63 463 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 GUCA1BQ9UMX6 200 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 CDYLQ9Y232 598 aa17.88■□□□□ 0.45
LINC01238-205ENST00000567549 SPTBN1Q01082 2364 aaKnown RBP17.88■□□□□ 0.45
LINC01238-205ENST00000567549 ZNF839A8K0R7 811 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 PHF2O75151 1096 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 PAMP19021 973 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 UQCRFS1P47985 274 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 BASP1P80723 227 aaKnown RBP17.87■□□□□ 0.45
LINC01238-205ENST00000567549 C4orf17Q53FE4 359 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 FIGLAQ6QHK4 219 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 NAPRTQ6XQN6 538 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 OVCH1Q7RTY7 1134 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 RBMXL3Q8N7X1 1067 aaKnown RBP17.87■□□□□ 0.45
LINC01238-205ENST00000567549 C1orf54Q8WWF1 131 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 TCF12Q99081 682 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 SELENOSQ9BQE4 189 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 SLC26A1Q9H2B4 701 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 ENAMQ9NRM1 1142 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 SEMA3GQ9NS98 782 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 CUTCQ9NTM9 273 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 CDC23Q9UJX2 597 aa17.87■□□□□ 0.45
LINC01238-205ENST00000567549 PRPF4O43172 522 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC01238-205ENST00000567549 ITGA3P26006 1051 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 CARSP49589 748 aaKnown RBP17.86■□□□□ 0.45
LINC01238-205ENST00000567549 SNX1Q13596 522 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 FAM69BQ5VUD6 431 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 ZNF534Q76KX8 674 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 HMGCLL1Q8TB92 370 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 NRTNQ99748 197 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 EPS8L2Q9H6S3 715 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 SPATA7Q9P0W8 599 aa17.86■□□□□ 0.45
LINC01238-205ENST00000567549 PLEKHB1Q9UF11 243 aaPredicted RBP17.86■□□□□ 0.45
LINC01238-205ENST00000567549 TTC7AQ9ULT0 858 aaPredicted RBP17.86■□□□□ 0.45
LINC01238-205ENST00000567549 SNRNP200O75643 2136 aaKnown RBP17.86■□□□□ 0.45
LINC01238-205ENST00000567549 FER1L5A0AVI2 2057 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 VPS26AO75436 327 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 ONECUT2O95948 504 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 TPBGLP0DKB5 382 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 ERVK-10P10266 1014 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 ATP5DP30049 168 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 PEBP1P30086 187 aaKnown RBP17.85■□□□□ 0.45
LINC01238-205ENST00000567549 HSD17B2P37059 387 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 SESN2P58004 480 aaPredicted RBP17.85■□□□□ 0.45
LINC01238-205ENST00000567549 OCA2Q04671 838 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 RAPSNQ13702 412 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 SLC9A5Q14940 896 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 PCM1Q15154 2024 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 NUP210LQ5VU65 1888 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 AGAP7PQ5VUJ5 663 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 PRAMEF13Q5VWM6 474 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 PRMT9Q6P2P2 845 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 LMNTD1Q8N9Z9 388 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 LINC01555Q8NAE3 123 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 ZNF778Q96MU6 729 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 AGAP4Q96P64 663 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 CHRAC1Q9NRG0 131 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 FAM114A2Q9NRY5 505 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 CDC14AQ9UNH5 594 aa17.85■□□□□ 0.45
LINC01238-205ENST00000567549 USP9YO00507 2555 aaPredicted RBP17.85■□□□□ 0.45
LINC01238-205ENST00000567549 SHANK1Q9Y566 2161 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 TCP11X1B4DZS4 312 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 PCDH17O14917 1159 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 ESR1P03372 595 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 CMPK1P30085 196 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 GRIA1P42261 906 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 EIF3BP55884 814 aaKnown RBP17.84■□□□□ 0.45
LINC01238-205ENST00000567549 RBBP7Q16576 425 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 TUBB8Q3ZCM7 444 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 MEI1Q5TIA1 1274 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 PPP1R32Q7Z5V6 425 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 Q8NA96 180 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 PRR7Q8TB68 274 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 ZNF552Q9H707 407 aaPredicted RBP17.84■□□□□ 0.45
LINC01238-205ENST00000567549 TREX1Q9NSU2 369 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 SAMD15Q9P1V8 674 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 KLK4Q9Y5K2 254 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 COPG1Q9Y678 874 aaKnown RBP17.84■□□□□ 0.45
LINC01238-205ENST00000567549 CCDC88CQ9P219 2028 aa17.84■□□□□ 0.45
LINC01238-205ENST00000567549 FITM1A5D6W6 292 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 E5RI56 91 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 CCNDBP1O95273 360 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 ATXN8OSP0DMR3 200 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 RPL22P35268 128 aaKnown RBP17.83■□□□□ 0.44
LINC01238-205ENST00000567549 ADARP55265 1226 aaKnown RBP17.83■□□□□ 0.44
LINC01238-205ENST00000567549 AP2B1P63010 937 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 MUM1Q2TAK8 710 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 TAX1BP1Q86VP1 789 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms