RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 DRG1Q9Y295 367 aaKnown RBP14.39□□□□□ -0.11
RNF40-209ENST00000566703 KLK4Q9Y5K2 254 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 CAPN6Q9Y6Q1 641 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 NAV2Q8IVL1 2488 aa14.39□□□□□ -0.11
RNF40-209ENST00000566703 A0A0U1RQJ8 604 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 FITM1A5D6W6 292 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 IQCF5A8MTL0 148 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 CD3EAPO15446 510 aaKnown RBP14.38□□□□□ -0.11
RNF40-209ENST00000566703 RPS3P23396 243 aaKnown RBP eCLIP14.38□□□□□ -0.11
RNF40-209ENST00000566703 MRPL49Q13405 166 aaKnown RBP14.38□□□□□ -0.11
RNF40-209ENST00000566703 CCNG2Q16589 344 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 FCRL6Q6DN72 434 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 DRICH1Q6PGQ1 229 aaPredicted RBP14.38□□□□□ -0.11
RNF40-209ENST00000566703 TTLL10Q6ZVT0 673 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 CISD2Q8N5K1 135 aaKnown RBP14.38□□□□□ -0.11
RNF40-209ENST00000566703 CCDC89Q8N998 374 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 LMNTD1Q8N9Z9 388 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 TTC29Q8NA56 475 aaPredicted RBP14.38□□□□□ -0.11
RNF40-209ENST00000566703 PRR7Q8TB68 274 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 LKAAEAR1Q8TD35 194 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 MAGEC3Q8TD91 643 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 C19orf60Q96EN9 201 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 DESI2Q9BSY9 194 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 TSGA10Q9BZW7 698 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 IL22Q9GZX6 179 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 P2RY12Q9H244 342 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 CHRAC1Q9NRG0 131 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 CUTCQ9NTM9 273 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 ASF1BQ9NVP2 202 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 GNPTGQ9UJJ9 305 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 COPG1Q9Y678 874 aaKnown RBP14.38□□□□□ -0.11
RNF40-209ENST00000566703 MAST4O15021 2626 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 ESPL1Q14674 2120 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 PCSK5Q92824 1860 aa14.38□□□□□ -0.11
RNF40-209ENST00000566703 SHANK1Q9Y566 2161 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 KRT86O43790 486 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 NDUFS3O75489 264 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 C1orf105O95561 183 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 ETS1P14921 441 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 ITGAXP20702 1163 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 RPL22P35268 128 aaKnown RBP14.37□□□□□ -0.11
RNF40-209ENST00000566703 CCNFP41002 786 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 SLC9A5Q14940 896 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 NAA25Q14CX7 972 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 NKG7Q16617 165 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 PRAMEF13Q5VWM6 474 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 IGFL2Q6UWQ7 119 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 LDB1Q86U70 411 aaPredicted RBP14.37□□□□□ -0.11
RNF40-209ENST00000566703 KRT222Q8N1A0 295 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 C2orf73Q8N5S3 287 aaPredicted RBP14.37□□□□□ -0.11
RNF40-209ENST00000566703 FOPNLQ96NB1 174 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 IL17FQ96PD4 163 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 SPSB2Q99619 263 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 ILKAPQ9H0C8 392 aaPredicted RBP14.37□□□□□ -0.11
RNF40-209ENST00000566703 SEMA3GQ9NS98 782 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 TREX1Q9NSU2 369 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 MARCH4Q9P2E8 410 aaPredicted RBP14.37□□□□□ -0.11
RNF40-209ENST00000566703 KLHL20Q9Y2M5 609 aa14.37□□□□□ -0.11
RNF40-209ENST00000566703 VSTM2BA6NLU5 285 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 CDC25BP30305 580 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 GRIA3P42263 894 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 CDK16Q00536 496 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 SNX1Q13596 522 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 NR6A1Q15406 480 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 RPS6KA1Q15418 735 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 IRAK1BP1Q5VVH5 260 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 OTOAQ7RTW8 1153 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 PPP4R1Q8TF05 950 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 MAIP1Q8WWC4 291 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 TCF12Q99081 682 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 SELENOSQ9BQE4 189 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 SLC6A20Q9NP91 592 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 AGPAT4Q9NRZ5 378 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 CDC23Q9UJX2 597 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 FBXL4Q9UKA2 621 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 TTC7AQ9ULT0 858 aaPredicted RBP14.36□□□□□ -0.11
RNF40-209ENST00000566703 ZKSCAN5Q9Y2L8 839 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 PCDHGA10Q9Y5H3 936 aa14.36□□□□□ -0.11
RNF40-209ENST00000566703 ANKUB1A6NFN9 424 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 H3BMM5 538 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 SOCS6O14544 535 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 PFDN6O15212 129 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 ITGA3P26006 1051 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 GLRBP48167 497 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
RNF40-209ENST00000566703 EMP3P54852 163 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 ADARP55265 1226 aaKnown RBP14.35□□□□□ -0.11
RNF40-209ENST00000566703 SESN2P58004 480 aaPredicted RBP14.35□□□□□ -0.11
RNF40-209ENST00000566703 SIX1Q15475 284 aaPredicted RBP14.35□□□□□ -0.11
RNF40-209ENST00000566703 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 MEI1Q5TIA1 1274 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 AGAP7PQ5VUJ5 663 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 PRMT9Q6P2P2 845 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 KIRREL2Q6UWL6 708 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 COX15Q7KZN9 410 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 SDCCAG8Q86SQ7 713 aaPredicted RBP14.35□□□□□ -0.11
RNF40-209ENST00000566703 PRUNE1Q86TP1 453 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 INPP5DQ92835 1189 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms