RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CH25HO95992 272 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PROS1P07225 676 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ASGR1P07306 291 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 HSPA8P11142 646 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 EZRP15311 586 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 COMTP21964 271 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PAICSP22234 425 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 LMO1P25800 156 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CHATP28329 748 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TACR3P29371 465 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CORO1AP31146 461 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 HOXA7P31268 230 aaPredicted RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 DCTDP32321 178 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 HSD17B3P37058 310 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC9A3P48764 834 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 FMO5P49326 533 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ALDH7A1P49419 539 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MFAP3P55082 362 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 INHBCP55103 352 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 NANOS3P60323 173 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CSNK2A1P68400 391 aaPredicted RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TNFRSF17Q02223 184 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ABRQ12979 859 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PDZK1IP1Q13113 114 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CUL3Q13618 768 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 NEDD9Q14511 834 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MVPQ14764 893 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 NR1D2Q14995 579 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TPD52L1Q16890 204 aaPredicted RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SYT16Q17RD7 645 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CCDC57Q2TAC2 916 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC36A3Q495N2 470 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CFAP221Q4G0U5 840 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 Q5PR19 223 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 C9orf50Q5SZB4 431 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CCNYL2Q5T2Q4 361 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 GCNT6Q5T4J0 391 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ARHGEF16Q5VV41 709 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TPGS2Q68CL5 300 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ARHGAP17Q68EM7 881 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 DUS1LQ6P1R4 473 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 BTNL8Q6UX41 500 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 DLEU7Q6UYE1 221 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 B3GNT6Q6ZMB0 384 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 RNF207Q6ZRF8 634 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TPRG1Q6ZUI0 275 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TMPRSS11BQ86T26 416 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC22A9Q8IVM8 553 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MISPQ8IVT2 679 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SFTPA2Q8IWL1 248 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC25A41Q8N5S1 370 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SMYD1Q8NB12 490 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 BBOF1Q8ND07 529 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CSNK2A3Q8NEV1 391 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 OR6C4Q8NGE1 309 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 OR52B4Q8NGK2 314 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 OR5M8Q8NGP6 311 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 OR10T2Q8NGX3 314 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 WIPF2Q8TF74 440 aaPredicted RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC25A43Q8WUT9 341 aaPredicted RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 WASF1Q92558 559 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PROX1Q92786 737 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 AZIN2Q96A70 460 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 THOC1Q96FV9 657 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 COG3Q96JB2 828 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 COQ10AQ96MF6 247 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MYADMQ96S97 322 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ZBTB18Q99592 522 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 GFI1Q99684 422 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CCT7Q99832 543 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CCDC77Q9BR77 488 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 IDI2Q9BXS1 227 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC2A11Q9BYW1 496 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PRRG4Q9BZD6 226 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 POLR1EQ9GZS1 481 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM39BQ9GZU3 492 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM234AQ9H0X4 552 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 VCX2Q9H322 139 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CDH20Q9HBT6 801 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 DNAJC4Q9NNZ3 241 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MLXIPLQ9NP71 852 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 PANK4Q9NVE7 773 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 TXNDC16Q9P2K2 825 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 KLHL13Q9P2N7 655 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 COPS7AQ9UBW8 275 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CHRNA9Q9UGM1 479 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CFAP45Q9UL16 551 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MGAT4BQ9UQ53 548 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 ENTPD4Q9Y227 616 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 SH3GLB1Q9Y371 365 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 NFE2L3Q9Y4A8 694 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 MFHAS1Q9Y4C4 1052 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 CEP164Q9UPV0 1460 aa3.2□□□□□ -1.9
HERPUD1-211ENST00000566550 UBE4BO95155 1302 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 TTC41PQ6P2S7 1318 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A087X1B8 175 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A0U1RRA0 63 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 LINC00854A0A1B0GVQ3 168 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms