RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 PCDHGA10Q9Y5H3 936 aa18.05■□□□□ 0.48
ABCA3-204ENST00000566200 HS3ST3B1Q9Y662 390 aa18.05■□□□□ 0.48
ABCA3-204ENST00000566200 KRT87PA6NCN2 255 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 RASGRF2O14827 1237 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 DSCR3O14972 297 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 IPO13O94829 963 aaKnown RBP18.04■□□□□ 0.48
ABCA3-204ENST00000566200 MED26O95402 600 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 S1PR4O95977 384 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 GAS8O95995 478 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 IFNB1P01574 187 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 KIF5AQ12840 1032 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 CCSMST1Q4G0I0 132 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 FASTKD1Q53R41 847 aaKnown RBP18.04■□□□□ 0.48
ABCA3-204ENST00000566200 FIGLAQ6QHK4 219 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 C1orf54Q8WWF1 131 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 DLG3Q92796 817 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 SLC22A18Q96BI1 424 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 TTC1Q99614 292 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 MESP1Q9BRJ9 268 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 SLC26A1Q9H2B4 701 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 WDR54Q9H977 334 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 RAB6BQ9NRW1 208 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 CUTCQ9NTM9 273 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 DOPEY1Q5JWR5 2465 aa18.04■□□□□ 0.48
ABCA3-204ENST00000566200 NRP2O60462 931 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 CTSVO60911 334 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 ALBP02768 609 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 APOA4P06727 396 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 ARSFP54793 590 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 PRAMEP78395 509 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 AIMP2Q13155 320 aaKnown RBP18.03■□□□□ 0.48
ABCA3-204ENST00000566200 ZNF787Q6DD87 383 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 KIRREL2Q6UWL6 708 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 SHISA6Q6ZSJ9 500 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 MAMDC2Q7Z304 686 aaPredicted RBP18.03■□□□□ 0.48
ABCA3-204ENST00000566200 ZADH2Q8N4Q0 377 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 PEX13Q92968 403 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 NACC2Q96BF6 587 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 P2RY12Q9H244 342 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 CHRAC1Q9NRG0 131 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 CATSPERZQ9NTU4 200 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.03■□□□□ 0.48
ABCA3-204ENST00000566200 CTSFQ9UBX1 484 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 RUVBL2Q9Y230 463 aaKnown RBP18.03■□□□□ 0.48
ABCA3-204ENST00000566200 COPG1Q9Y678 874 aaKnown RBP18.03■□□□□ 0.48
ABCA3-204ENST00000566200 NFS1Q9Y697 457 aa18.03■□□□□ 0.48
ABCA3-204ENST00000566200 MDC1Q14676 2089 aaKnown RBP18.02■□□□□ 0.48
ABCA3-204ENST00000566200 FITM1A5D6W6 292 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 ANKUB1A6NFN9 424 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 E7EVH7 732 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 F8W8V4 182 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 PRMT5O14744 637 aaPredicted RBP18.02■□□□□ 0.48
ABCA3-204ENST00000566200 KLHL41O60662 606 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 RPN2P04844 631 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 APRTP07741 180 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 ZSCAN5DPP0CG00 497 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 ITGA3P26006 1051 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 PSMB5P28074 263 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 OR1D4P47884 311 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 GLRBP48167 497 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 SNX1Q13596 522 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 SF1Q15637 639 aaKnown RBP18.02■□□□□ 0.48
ABCA3-204ENST00000566200 HIF1AQ16665 826 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 PRAMEF13Q5VWM6 474 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 IGFL2Q6UWQ7 119 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 SLC13A5Q86YT5 568 aaPredicted RBP18.02■□□□□ 0.48
ABCA3-204ENST00000566200 METTL27Q8N6F8 245 aaPredicted RBP18.02■□□□□ 0.48
ABCA3-204ENST00000566200 DENND1AQ8TEH3 1009 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 TM9SF4Q92544 642 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 TSSK1BQ9BXA7 367 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 SOX17Q9H6I2 414 aaPredicted RBP18.02■□□□□ 0.48
ABCA3-204ENST00000566200 TREX1Q9NSU2 369 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 CDC23Q9UJX2 597 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 ZNF148Q9UQR1 794 aa18.02■□□□□ 0.48
ABCA3-204ENST00000566200 VSTM2BA6NLU5 285 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 C1orf105O95561 183 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 BDKRB1P46663 353 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 YBX1P67809 324 aaKnown RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 CRADDP78560 199 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 Q0VFX4 171 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 GRM7Q14831 915 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 SIX1Q15475 284 aaPredicted RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 ZC3H12BQ5HYM0 836 aaKnown RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 FRMPD2BQ6IN97 320 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 NLRP9Q7RTR0 991 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 PPHLN1Q8NEY8 458 aaKnown RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 UBE2Q2Q8WVN8 375 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 WDR77Q9BQA1 342 aaPredicted RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 SELENOSQ9BQE4 189 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 FRMD8P1Q9BZ68 369 aaPredicted RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 INTS7Q9NVH2 962 aaKnown RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 SLC39A10Q9ULF5 831 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 NOVA2Q9UNW9 492 aaKnown RBP18.01■□□□□ 0.47
ABCA3-204ENST00000566200 SLC5A6Q9Y289 635 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 KLK4Q9Y5K2 254 aa18.01■□□□□ 0.47
ABCA3-204ENST00000566200 A0A1W2PPV9 198 aa18■□□□□ 0.47
ABCA3-204ENST00000566200 CD3EAPO15446 510 aaKnown RBP18■□□□□ 0.47
ABCA3-204ENST00000566200 RPL22P35268 128 aaKnown RBP18■□□□□ 0.47
ABCA3-204ENST00000566200 PPARGP37231 505 aaPredicted RBP18■□□□□ 0.47
ABCA3-204ENST00000566200 DCTP40126 519 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms