RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF490Q9ULM2 529 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-210ENST00000564587 CA14Q9ULX7 337 aa15.11■□□□□ 0.01
COMMD4-210ENST00000564587 PRPF19Q9UMS4 504 aaKnown RBP15.11■□□□□ 0.01
COMMD4-210ENST00000564587 EIF3LQ9Y262 564 aaKnown RBP15.11■□□□□ 0.01
COMMD4-210ENST00000564587 GPR45Q9Y5Y3 372 aa15.11■□□□□ 0.01
COMMD4-210ENST00000564587 KCNE1BA0A087WTH5 132 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 PRAMEF26H0Y7S4 382 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 RSL1D1O76021 490 aaKnown RBP15.1■□□□□ 0.01
COMMD4-210ENST00000564587 HSD3B1P14060 373 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 PRPH2P23942 346 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 HSD3B2P26439 372 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 LAPTM5Q13571 262 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 LRP8Q14114 963 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 E2F2Q14209 437 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 ZXDCQ2QGD7 858 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-210ENST00000564587 AP5B1Q2VPB7 878 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 MMEL1Q495T6 779 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 KIAA0895LQ68EN5 471 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 GRHL2Q6ISB3 625 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 HACD2Q6Y1H2 254 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 CHST15Q7LFX5 561 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-210ENST00000564587 SCUBE1Q8IWY4 988 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 DCBLD1Q8N8Z6 715 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 SELENOMQ8WWX9 145 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 PYCR2Q96C36 320 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 MED8Q96G25 268 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 MARK4Q96L34 752 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 OR2M4Q96R27 311 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 HAUS8Q9BT25 410 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 EHD1Q9H4M9 534 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 MVB12BQ9H7P6 319 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 CCDC177Q9NQR7 707 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-210ENST00000564587 INTS7Q9NVH2 962 aaKnown RBP15.1■□□□□ 0.01
COMMD4-210ENST00000564587 NDUFAF1Q9Y375 327 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 PRKAB1Q9Y478 270 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 PTGDR2Q9Y5Y4 395 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 HEBP2Q9Y5Z4 205 aa15.1■□□□□ 0.01
COMMD4-210ENST00000564587 DOCK9Q9BZ29 2069 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 H0YIV9 168 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 FFAR3O14843 346 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 AIM2O14862 343 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 LSM1O15116 133 aaKnown RBP15.09■□□□□ 0.01
COMMD4-210ENST00000564587 GPR42O15529 346 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 ACP5P13686 325 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 ACPPP15309 386 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 ITGAXP20702 1163 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 MAPK1P28482 360 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 RABIFP47224 123 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 HTR6P50406 440 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 NUDT2P50583 147 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 CSTF3Q12996 717 aaKnown RBP15.09■□□□□ 0.01
COMMD4-210ENST00000564587 CPSF6Q16630 551 aaKnown RBP eCLIP15.09■□□□□ 0.01
COMMD4-210ENST00000564587 CCSMST1Q4G0I0 132 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 XKR6Q5GH73 641 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 PAGE2BQ5JRK9 111 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 TCHHL1Q5QJ38 904 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-210ENST00000564587 CACHD1Q5VU97 1274 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 FRG2Q64ET8 278 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 SCIMPQ6UWF3 145 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 LCTLQ6UWM7 567 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 UBALD2Q8IYN6 164 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 PGAM4Q8N0Y7 254 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 GJD3Q8N144 294 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 SFRP1Q8N474 314 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 FAM13CQ8NE31 585 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 OR2T11Q8NH01 316 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 UBE2E3Q969T4 207 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 WDR34Q96EX3 536 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 FRG2BQ96QU4 278 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 THTPAQ9BU02 230 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 EFCAB11Q9BUY7 163 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 PCED1AQ9H1Q7 454 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 C1orf109Q9NX04 203 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 CCDC167Q9P0B6 97 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 EBF1Q9UH73 591 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 MOSPD1Q9UJG1 213 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 SUFUQ9UMX1 484 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 TMED5Q9Y3A6 229 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 GPSM3Q9Y4H4 160 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 CCL27Q9Y4X3 112 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 PCDHGA11Q9Y5H2 935 aa15.09■□□□□ 0.01
COMMD4-210ENST00000564587 PRSS38A1L453 326 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 PRR19A6NJB7 356 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 E7ENX8 843 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 NRP2O60462 931 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 SLC22A3O75751 556 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
COMMD4-210ENST00000564587 ERGP11308 486 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 CD6P30203 668 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 THOP1P52888 689 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 TBPL1P62380 186 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 SLC25A3Q00325 362 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 TAP2Q03519 686 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 UBXN2BQ14CS0 331 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 CYP2A13Q16696 494 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 HIST2H2ACQ16777 129 aaPredicted RBP15.08■□□□□ 0
COMMD4-210ENST00000564587 TRMT5Q32P41 509 aaKnown RBP15.08■□□□□ 0
COMMD4-210ENST00000564587 HIST2H2AA3Q6FI13 130 aa15.08■□□□□ 0
COMMD4-210ENST00000564587 WASH2PQ6VEQ5 465 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms