RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 HES7Q9BYE0 225 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 ZDHHC3Q9NYG2 299 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 OR6C2Q9NZP2 312 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 CTTNBP2NLQ9P2B4 639 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 STOX2Q9P2F5 926 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-204ENST00000563739 UVRAGQ9P2Y5 699 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 SEC14L3Q9UDX4 400 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 CIDEBQ9UHD4 219 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 CRLS1Q9UJA2 301 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 NEU2Q9Y3R4 380 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 HYOU1Q9Y4L1 999 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 MAU2Q9Y6X3 613 aa9.89□□□□□ -0.83
SF3B3-204ENST00000563739 FN1P02751 2386 aaKnown RBP9.89□□□□□ -0.83
SF3B3-204ENST00000563739 IGHV1-45A0A0A0MS14 117 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 IFRD1O00458 451 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-204ENST00000563739 FFAR3O14843 346 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 GPR42O15529 346 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 CLDN14O95500 239 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 SERPINC1P01008 464 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 ACPPP15309 386 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 CAPN3P20807 821 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 ALAS2P22557 587 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 GRIA3P42263 894 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 YBX1P67809 324 aaKnown RBP9.88□□□□□ -0.83
SF3B3-204ENST00000563739 CSNK1G2P78368 415 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 ARG2P78540 354 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 EEF1A2Q05639 463 aaKnown RBP9.88□□□□□ -0.83
SF3B3-204ENST00000563739 CACNG1Q06432 222 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 MESDQ14696 234 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 VWA2Q5GFL6 755 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 CCDC70Q6NSX1 233 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 HIBCHQ6NVY1 386 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-204ENST00000563739 TMEM207Q6UWW9 146 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 SNX20Q7Z614 316 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 SERPINA9Q86WD7 417 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 SIAH3Q8IW03 269 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 PRSS58Q8IYP2 241 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 TBC1D21Q8IYX1 336 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 RNF214Q8ND24 703 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 DLG3Q92796 817 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 DMRTA2Q96SC8 542 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 CRB3Q9BUF7 120 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 RNF32Q9H0A6 362 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 GBA3Q9H227 469 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-204ENST00000563739 DLL4Q9NR61 685 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 MEMO1Q9Y316 297 aa9.88□□□□□ -0.83
SF3B3-204ENST00000563739 LOC102723996A0A087X1L8 192 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 LOC105369274A0A096LPK9 316 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 LOC102723532A0A0G2JNH3 316 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 H7C0S8 307 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 MAN1A2O60476 641 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 GYPCP04921 128 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 SERPINA7P05543 415 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 ZGLP1P0C6A0 271 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 PSMA3P25788 255 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 PSMB5P28074 263 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 MC4RP32245 332 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 MARCKSL1P49006 195 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 ST13P50502 369 aaKnown RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 TFF3Q07654 80 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 KIR2DS3Q14952 304 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 NLRP9Q7RTR0 991 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 KBTBD2Q8IY47 623 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 OR4N4Q8N0Y3 316 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 MARVELD2Q8N4S9 558 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 C2orf73Q8N5S3 287 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 AMER3Q8N944 861 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 MDS2Q8NDY4 140 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 TFB1MQ8WVM0 346 aaKnown RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 N4BP2L2Q92802 583 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 ULK4Q96C45 1275 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 CXXC4Q9H2H0 198 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 GRPEL1Q9HAV7 217 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 KLHL8Q9P2G9 620 aaPredicted RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 TNFRSF10DQ9UBN6 386 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 NXT1Q9UKK6 140 aaKnown RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 ASF1AQ9Y294 204 aa9.87□□□□□ -0.83
SF3B3-204ENST00000563739 ANK3Q12955 4377 aaKnown RBP9.87□□□□□ -0.83
SF3B3-204ENST00000563739 hCG_1818297A0A087WSY0 165 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 ASPDHA6ND91 283 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 OR51F1A6NGY5 319 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 ISM1B1AKI9 464 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 MAP2K7O14733 419 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 CST8O60676 142 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 PRAMEF2O60811 474 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 USP1O94782 785 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 RASAL1O95294 804 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 BMP10O95393 424 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 AP2A1O95782 977 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 ITGALP20701 1170 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 PSMB4P28070 264 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 ARSFP54793 590 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 HSF1Q00613 529 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 BRD3Q15059 726 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 PRTGQ2VWP7 1150 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 LRRC38Q5VT99 294 aa9.86□□□□□ -0.83
SF3B3-204ENST00000563739 MTFR2Q6P444 385 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms