RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 RAVER1Q8IY67 606 aaKnown RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 ST13P5Q8NFI4 369 aaPredicted RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 NELL1Q92832 810 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 MUL1Q969V5 352 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 DHRS1Q96LJ7 313 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ZIC5Q96T25 663 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 FEM1AQ9BSK4 669 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 NECTIN3Q9NQS3 549 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 THG1LQ9NWX6 298 aaKnown RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 USE1Q9NZ43 259 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 TBC1D3BA6NDS4 549 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 TULP3O75386 442 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 C8AP07357 584 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ACRP10323 421 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 EPORP19235 508 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ARNTP27540 789 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 GPR1P46091 355 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 TRPC1P48995 793 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 HTR6P50406 440 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 CYP4F2P78329 520 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ADAM17P78536 824 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 CDC20Q12834 499 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 SF3B4Q15427 424 aaKnown RBP eCLIP10.21□□□□□ -0.781e-6■■■■□ 19.3
RNF40-204ENST00000563683 TAS1R1Q7RTX1 841 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 PIWIL3Q7Z3Z3 882 aaKnown RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 ZFP90Q8TF47 636 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 TMBIM1Q969X1 311 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 FKBP10Q96AY3 582 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 TXNDC15Q96J42 360 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 EXD2Q9NVH0 621 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 DKK3Q9UBP4 350 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ZNF99A8MXY4 864 aaPredicted RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 H3BN98 237 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 FPGTO14772 594 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 NDUFB5O43674 189 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 MATN4O95460 622 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 GLUD1P00367 558 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 GSTM1P09488 218 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 RAP2AP10114 183 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 TCEA1P23193 301 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 SLC6A4P31645 630 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 RPL34P49207 117 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 ST13P50502 369 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 PRKAG1P54619 331 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 CNTN1Q12860 1018 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 AQP6Q13520 282 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 INAVAQ3KP66 663 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 C6orf141Q5SZD1 244 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 MFSD4BQ5TF39 518 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 Q6ZVU0 165 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 MFSD6LQ8IWD5 586 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 OR52J3Q8NH60 311 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ATL1Q8WXF7 558 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 NODALQ96S42 347 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 BOCQ9BWV1 1114 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 C6orf62Q9GZU0 229 aaPredicted RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 SUV39H2Q9H5I1 410 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ARNT2Q9HBZ2 717 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 RPS6KA6Q9UK32 745 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 DUSP12Q9UNI6 340 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 PCDHGA11Q9Y5H2 935 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 PCDHA9Q9Y5H5 950 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 CNTRLQ7Z7A1 2325 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 TCRBV5S2A0A599 114 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 PDZK1P1A8MUH7 402 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 UPK3BL1B0FP48 263 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 UPK3BL2E5RIL1 263 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 KPNA5O15131 536 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 GRM6O15303 877 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 DIRAS1O95057 198 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 PGRP06401 933 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 STK19P49842 368 aaPredicted RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 ATAD3BQ5T9A4 648 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 LACC1Q8IV20 430 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 PGBD5Q8N414 524 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ING5Q8WYH8 240 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 LRCH3Q96II8 777 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 SLC30A3Q99726 388 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 SIAEQ9HAT2 523 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 CAPN10Q9HC96 672 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ANKHQ9HCJ1 492 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 KRT84Q9NSB2 600 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ZIM2Q9NZV7 527 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ASF1AQ9Y294 204 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 MRPS23Q9Y3D9 190 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 TTC3P53804 2025 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 PSMD11O00231 422 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 IFRD1O00458 451 aaPredicted RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 SNPHO15079 494 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 ADAM12O43184 909 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 POP4O95707 220 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 CDH1P12830 882 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 HTR1BP28222 390 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 RRM2P31350 389 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 SHMT2P34897 504 aa10.2□□□□□ -0.78
RNF40-204ENST00000563683 KRR1Q13601 381 aaKnown RBP10.2□□□□□ -0.78
RNF40-204ENST00000563683 CPTPQ5TA50 214 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms