RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SPATS2Q86XZ4 545 aaKnown RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 TDRPQ86YL5 185 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 MMAAQ8IVH4 418 aaKnown RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 RAVER1Q8IY67 606 aaKnown RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 CBARPQ8N350 705 aaPredicted RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 HDDC3Q8N4P3 179 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 OTUD6BQ8N6M0 293 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 PPM1NQ8N819 430 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 IL17RCQ8NAC3 791 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 OR4L1Q8NH43 312 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 RPLP0P6Q8NHW5 317 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 CXorf40AQ8TE69 158 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 LINC00476Q8WZB0 136 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 HDAC10Q969S8 669 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDR2-203ENST00000563573 SIPA1Q96FS4 1042 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 CERS2Q96G23 380 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 CDKN2AIPNLQ96HQ2 116 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 TBATAQ96M53 351 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 NSMCE3Q96MG7 304 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 ASB2Q96Q27 587 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 LYSMD1Q96S90 227 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 ACOX2Q99424 681 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 GABRG3Q99928 467 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 OMDQ99983 421 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 FAM167BQ9BTA0 163 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 REXO4Q9GZR2 422 aaKnown RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 RSPH9Q9H1X1 276 aaPredicted RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 BPIFA1Q9NP55 256 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 MED4Q9NPJ6 270 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 ARHGEF3Q9NR81 526 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 IARS2Q9NSE4 1012 aaKnown RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 ZNF446Q9NWS9 450 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 PKD2L2Q9NZM6 624 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 PSMC3IPQ9P2W1 217 aaPredicted RBP4.57□□□□□ -1.68
CDR2-203ENST00000563573 MMP17Q9ULZ9 603 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 ZNF711Q9Y462 761 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 ARL5AQ9Y689 179 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 MUC3AQ02505 3323 aa4.57□□□□□ -1.68
CDR2-203ENST00000563573 CKAP5Q14008 2032 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 MUC22E2RYF6 1773 aaPredicted RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 ZCWPW2A0A1B0GU75 182 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TCRBV9S1A1TA0A576 114 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TSPAN11A1L157 253 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CCDC78A2IDD5 438 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 FAM159BA6NKW6 160 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SMIM23A6NLE4 172 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 HMGB1P1B2RPK0 211 aaPredicted RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 F8W8V4 182 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 H7C0S8 307 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 PSMD11O00231 422 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TSPAN6O43657 245 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 BUD23O43709 281 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 AP1G1O43747 822 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 NDUFS3O75489 264 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 RNASEH2AO75792 299 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 MT-ND3P03897 115 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SHBGP04278 402 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 PYGLP06737 847 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CTSLP07711 333 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SNRPAP09012 282 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 ALPIP09923 528 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ELFN1P0C7U0 828 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ERVK-10P10266 1014 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ADRB3P13945 408 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 OXTRP30559 389 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SPAM1P38567 509 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 PSMD8P48556 350 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 POLD2P49005 469 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TTPAP49638 278 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 DGKEP52429 567 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SLC12A2P55011 1212 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CSE1LP55060 971 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 LGALS4P56470 323 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 RPS14P62263 151 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 DNAJC3Q13217 504 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SGCGQ13326 291 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 MSLNQ13421 630 aaPredicted RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 ITGA9Q13797 1035 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ACOX1Q15067 660 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 RASA2Q15283 850 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CST6Q15828 149 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 GPR33Q49SQ1 333 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TMEM52BQ4KMG9 183 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ZRANB3Q5FWF4 1079 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 AARS2Q5JTZ9 985 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 AGBL2Q5U5Z8 902 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 NEPROQ6NW34 567 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 AFTPHQ6ULP2 937 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CERS6Q6ZMG9 384 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 KIAA0408Q6ZU52 694 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 DPPA4Q7L190 304 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 PARS2Q7L3T8 475 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 TAS2R42Q7RTR8 314 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 PTAR1Q7Z6K3 402 aaPredicted RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 SYT12Q8IV01 421 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SFTPA1Q8IWL2 248 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 NRSN1Q8IZ57 195 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 OR4K2Q8NGD2 314 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 OR13C4Q8NGS5 318 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms