RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 BHLHE23Q8NDY6 225 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 OR52L2PQ8NGH6 319 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 B4GALNT2Q8NHY0 566 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HUS1BQ8NHY5 278 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TFAP2CQ92754 450 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 INPP5DQ92835 1189 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 APBB2Q92870 758 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 MAP4K1Q92918 833 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CAPNS2Q96L46 248 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 IFT74Q96LB3 600 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ATP6V1G3Q96LB4 118 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF607Q96SK3 696 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 GPHA2Q96T91 129 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TUBA1CQ9BQE3 449 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 GORASP1Q9BQQ3 440 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LSG1Q9H089 658 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC28A3Q9HAS3 691 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PPANQ9NQ55 473 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM248Q9NWD8 314 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HSFX1Q9UBD0 423 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 DNAJB4Q9UDY4 337 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 RNF150Q9ULK6 438 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 B3GNT3Q9Y2A9 372 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 YBX2Q9Y2T7 364 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 MRPS2Q9Y399 296 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 AP4B1Q9Y6B7 739 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SRCAPQ6ZRS2 3230 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 WDR33Q9C0J8 1336 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 A0A0U1RQJ8 604 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 MACROD2A1Z1Q3 448 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 OR6C68A6NDL8 312 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 CBY3A6NI87 242 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 UBE2Q2LH0YL09 131 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 NVLO15381 856 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SPRY2O43597 315 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 IPO13O94829 963 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC25A27O95847 323 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 ATP6V1C1P21283 382 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 HOXD9P28356 352 aaPredicted RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 RFC2P35250 354 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 MC3RP41968 323 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC1A4P43007 532 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 NR2C2P49116 596 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 PRELPP51888 382 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC37A1P57057 533 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TAS2R40P59535 323 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC20A2Q08357 652 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 DNASE1L3Q13609 305 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 HNRNPDQ14103 355 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 RPE65Q16518 533 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 UGCGQ16739 394 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 CDO1Q16878 200 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 LRIT3Q3SXY7 679 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC36A3Q495N2 470 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 ANKRD16Q6P6B7 361 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 KYAT3Q6YP21 454 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 DPY19L3Q6ZPD9 716 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 MICALCLQ6ZW33 695 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TMPRSS9Q7Z410 1059 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TMCO2Q7Z6W1 182 aaPredicted RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 NEK8Q86SG6 692 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TSPAN33Q86UF1 283 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 NRROSQ86YC3 692 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 LCORLQ8N3X6 602 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 LEMD2Q8NC56 503 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 OR56B1Q8NGI3 324 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 OR10T2Q8NGX3 314 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 SDR42E1Q8WUS8 393 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 RAD54LQ92698 747 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 NT5C3BQ969T7 300 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 OPTNQ96CV9 577 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 C11orf24Q96F05 449 aaPredicted RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 OTUB1Q96FW1 271 aaPredicted RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 PCYT2Q99447 389 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 PLIN2Q99541 437 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 GAL3ST1Q99999 423 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 PIGQQ9BRB3 760 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TM6SF1Q9BZW5 370 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 THAP2Q9H0W7 228 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 HAUS4Q9H6D7 363 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 ENTPD7Q9NQZ7 604 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 KLHL1Q9NR64 748 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TAS2R14Q9NYV8 317 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 CNOT2Q9NZN8 540 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 STK38LQ9Y2H1 464 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 PKP3Q9Y446 797 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 HBS1LQ9Y450 684 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 LSM4Q9Y4Z0 139 aaKnown RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 MAU2Q9Y6X3 613 aa5.06□□□□□ -1.6
VPS35P1-201ENST00000563400 KIAA1551Q9HCM1 1747 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CCL15-CCL14A0A0B4J2E2 113 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ANKRD61A6NGH8 418 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ACOD1A6NK06 481 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 DRGXA6NNA5 263 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 B5MCH6 92 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CYR61O00622 381 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 PRRG1O14668 218 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 AKAP8O43823 692 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 FCGR3BO75015 233 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms