RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ACVR2AP27037 513 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 PTPN6P29350 595 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 OR1D2P34982 312 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CA5AP35218 305 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 HNF1BP35680 557 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CSKP41240 450 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 TM4SF4P48230 202 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 RPIAP49247 311 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GATMP50440 423 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GP2P55259 537 aaKnown RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 IL5RAQ01344 420 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 MVKQ03426 396 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 RELAQ04206 551 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 AQP6Q13520 282 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ARHGEF7Q14155 803 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SPCS2Q15005 226 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CHRNA6Q15825 494 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 TAF12Q16514 161 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GPR162Q16538 588 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CTF1Q16619 201 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CAPN13Q6MZZ7 669 aaPredicted RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 CES5AQ6NT32 575 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 SVOPQ8N4V2 548 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 L3MBTL4Q8NA19 623 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 FAR1Q8WVX9 515 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SGCDQ92629 289 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CCDC97Q96F63 343 aaPredicted RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 DGCR6LQ9BY27 220 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CCNB1IP1Q9NPC3 277 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 IL1RAPQ9NPH3 570 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 RPS6KA6Q9UK32 745 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SCN8AQ9UQD0 1980 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 KCNE1BA0A087WTH5 132 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 J3QRK9 145 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 PRMT3O60678 531 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 FKBP9O95302 570 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 EFEMP2O95967 443 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 C8GP07360 202 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 MPC1LP0DKB6 136 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 PFKLP17858 780 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 PRKACGP22612 351 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 DNAJA1P31689 397 aaKnown RBP12.75□□□□□ -0.37
USB1-207ENST00000563149 HNMTP50135 292 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 EMX1Q04741 257 aaPredicted RBP12.75□□□□□ -0.37
USB1-207ENST00000563149 TPGS2Q68CL5 300 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 OR2T5Q6IEZ7 315 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 TPGS1Q6ZTW0 290 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 IGFN1Q86VF2 1251 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 DBF4BQ8NFT6 615 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 OR2T29Q8NH02 315 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 RORBQ92753 470 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 NELL1Q92832 810 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 FBXL8Q96CD0 374 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 FCRL1Q96LA6 429 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 APOL4Q9BPW4 351 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 ELOVL6Q9H5J4 265 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 ATP13A3Q9H7F0 1226 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 SLC6A13Q9NSD5 602 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 AP1M2Q9Y6Q5 423 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 ANKRD12Q6UB98 2062 aa12.75□□□□□ -0.37
USB1-207ENST00000563149 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PTGES3LE9PB15 166 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 RFXANKO14593 260 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SLC16A5O15375 505 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 DPM1O60762 260 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SEC24AO95486 1093 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 IGSF6O95976 241 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 EPORP19235 508 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 FPR1P21462 350 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SERPINB10P48595 397 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 MLLT10P55197 1068 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SRSF11Q05519 484 aaKnown RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 MTAPQ13126 283 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 ITGADQ13349 1161 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CDH18Q13634 790 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 RAPSNQ13702 412 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CPSF6Q16630 551 aaKnown RBP eCLIP12.74□□□□□ -0.37
USB1-207ENST00000563149 DGUOKQ16854 277 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SYT6Q5T7P8 510 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 ANKRD34AQ69YU3 496 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 KDM4DQ6B0I6 523 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 FAM217AQ8IXS0 508 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 TMCO5AQ8N6Q1 288 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 OR7A2PQ8NGA2 310 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CLHC1Q8NHS4 586 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 MCOLN3Q8TDD5 553 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CSGALNACT1Q8TDX6 532 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 MTFMTQ96DP5 389 aaKnown RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 SLC12A9Q9BXP2 914 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 CCDC90BQ9GZT6 254 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 LTB4R2Q9NPC1 389 aa12.74□□□□□ -0.37
USB1-207ENST00000563149 PAK1IP1Q9NWT1 392 aaPredicted RBP12.74□□□□□ -0.37
USB1-207ENST00000563149 ARL15Q9NXU5 204 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms