RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 NXT1Q9UKK6 140 aaKnown RBP12.46□□□□□ -0.41
SF3B3-202ENST00000562722 NOVA2Q9UNW9 492 aaKnown RBP12.46□□□□□ -0.41
SF3B3-202ENST00000562722 CSAG2Q9Y5P2 127 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 ERI2A8K979 691 aaKnown RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 IQCF5A8MTL0 148 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 MIF4GDA9UHW6 222 aaKnown RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 FTCDO95954 541 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 ALBP02768 609 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 ITGAXP20702 1163 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 PSMA3P25788 255 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 NKG7Q16617 165 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 AARS2Q5JTZ9 985 aaKnown RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 PTRHD1Q6GMV3 140 aaKnown RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 FIGLAQ6QHK4 219 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 UNC5DQ6UXZ4 953 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 KRT222Q8N1A0 295 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 RAB42Q8N4Z0 105 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 ST6GALNAC3Q8NDV1 305 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 OR2L8Q8NGY9 312 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 SLC35B2Q8TB61 432 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 ATG4AQ8WYN0 398 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 CTSFQ9UBX1 484 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 OSGIN2Q9Y236 505 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 REXO2Q9Y3B8 237 aaKnown RBP12.45□□□□□ -0.42
SF3B3-202ENST00000562722 HS3ST3B1Q9Y662 390 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 MAU2Q9Y6X3 613 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 FAM169AQ9Y6X4 670 aa12.45□□□□□ -0.42
SF3B3-202ENST00000562722 TCRBV7S2A1N4TA0A589 114 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 SOCS6O14544 535 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 LRRTM2O43300 516 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 UQCRHP07919 91 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 ADRA1DP25100 572 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 FDFT1P37268 417 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 OR1D4P47884 311 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 PER3P56645 1201 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 VSX2P58304 361 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 KLF1Q13351 362 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF169Q14929 603 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 CRB2Q5IJ48 1285 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 YOD1Q5VVQ6 348 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 FCRL6Q6DN72 434 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 RAD9BQ6WBX8 426 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 LINC00696Q6ZRV3 163 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 COX15Q7KZN9 410 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 NLRP9Q7RTR0 991 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 LDB1Q86U70 411 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 PRSS58Q8IYP2 241 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 PPHLN1Q8NEY8 458 aaKnown RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 GRHL3Q8TE85 626 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 COG1Q8WTW3 980 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 MAGEB10Q96LZ2 347 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-202ENST00000562722 SPSB2Q99619 263 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 MIPEPQ99797 713 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 CRB3Q9BUF7 120 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 CARD6Q9BX69 1037 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 RAB11FIP5Q9BXF6 653 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 LHPPQ9H008 270 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 ETNK1Q9HBU6 452 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 SEMA3GQ9NS98 782 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 CATSPERZQ9NTU4 200 aa12.44□□□□□ -0.42
SF3B3-202ENST00000562722 SEC16AO15027 2179 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 MYO9AB2RTY4 2548 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 FER1L5A0AVI2 2057 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 GPC4O75487 556 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 EIF2S1P05198 315 aaKnown RBP12.43□□□□□ -0.42
SF3B3-202ENST00000562722 AOAHP28039 575 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 GRIA1P42261 906 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 TSFMP43897 325 aaKnown RBP12.43□□□□□ -0.42
SF3B3-202ENST00000562722 BDKRB1P46663 353 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 GCGRP47871 477 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 OCA2Q04671 838 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 GRB7Q14451 532 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 SEMA3AQ14563 771 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 TLR1Q15399 786 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 FAM214AQ32MH5 1076 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 WASHC2DQ5SRD0 308 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 FAM180AQ6UWF9 173 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF534Q76KX8 674 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 KCNMB4Q86W47 210 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 TXLNBQ8N3L3 684 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF778Q96MU6 729 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 FOPNLQ96NB1 174 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 PANX3Q96QZ0 392 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 MENTQ9BUN1 341 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 SLC26A1Q9H2B4 701 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF160Q9HCG1 818 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 RAB6BQ9NRW1 208 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 IL1RAPL1Q9NZN1 696 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 GNPTGQ9UJJ9 305 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
SF3B3-202ENST00000562722 TTC7AQ9ULT0 858 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms