RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ANXA5P08758 320 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 MAP4P27816 1152 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 SULT1C3Q6IMI6 304 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 DUS1LQ6P1R4 473 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 DHRS13Q6UX07 377 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 WASH2PQ6VEQ5 465 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 PDZD3Q86UT5 571 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 CRLF3Q8IUI8 442 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 MAPK15Q8TD08 544 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 RMDN2Q96LZ7 410 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 INSM2Q96T92 566 aaPredicted RBP21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 TRMOQ9BU70 441 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 C20orf27Q9GZN8 174 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 WASH6PQ9NQA3 447 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 ARL15Q9NXU5 204 aa21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 TNPO3Q9Y5L0 923 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-202ENST00000562045 RFPL3O75679 317 aa21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 SUPT7LO94864 414 aa21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 GLB1P16278 677 aa21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 UBE2IP63279 158 aaKnown RBP21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 CCDC3Q9BQI4 270 aa21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 C1QTNF3Q9BXJ4 246 aa21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 WDFY3Q8IZQ1 3526 aa21.79■■□□□ 1.08
SYNGR3-202ENST00000562045 IFRD1O00458 451 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 LYPLA1O75608 230 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 SIX3O95343 332 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 EEF1DP29692 281 aaKnown RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 DUSP3P51452 185 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 RPE65Q16518 533 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 ANKS6Q68DC2 871 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 UNC5DQ6UXZ4 953 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 FRMD7Q6ZUT3 714 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 Q8N9G6 341 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 FBXO15Q8NCQ5 510 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 ZNF473Q8WTR7 871 aaKnown RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 RHBDF1Q96CC6 855 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 SORT1Q99523 831 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 ZNF395Q9H8N7 513 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 CPNE7Q9UBL6 633 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 PTBP2Q9UKA9 531 aaKnown RBP21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 CACNA1AO00555 2505 aa21.78■■□□□ 1.08
SYNGR3-202ENST00000562045 ARHGEF33A8MVX0 844 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 NUDT21O43809 227 aaKnown RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 TGDSO95455 350 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 RPS17P08708 135 aaKnown RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 SLC35G4P0C7Q5 338 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 TROVE2P10155 538 aaKnown RBP eCLIP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 ACADLP28330 430 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 ARRB2P32121 409 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 FASLGP48023 281 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 HNMTP50135 292 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 HHEXQ03014 270 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 GALNT1Q10472 559 aaPredicted RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 PCBP2Q15366 365 aaKnown RBP eCLIP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 UNC50Q53HI1 259 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 ARL13AQ5H913 290 aaPredicted RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 CAPRIN2Q6IMN6 1127 aaKnown RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 TCAIMQ8N3R3 496 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 MOCOSQ96EN8 888 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 GSTO2Q9H4Y5 243 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 EML4Q9HC35 981 aaKnown RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 ACSS2Q9NR19 701 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 WWOXQ9NZC7 414 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 KIR2DS5A0A0G2JLQ3 304 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 A0A0G2JNG1 304 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 KIR2DS3K7RE56 304 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 XRCC1P18887 633 aaPredicted RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 KIR2DS5Q14953 304 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 GKAP1Q5VSY0 366 aaPredicted RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 ZNF438Q7Z4V0 828 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 MARCH9Q86YJ5 346 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 ELAC2Q9BQ52 826 aaKnown RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 IMP3Q9NV31 184 aaKnown RBP21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 PCDHGA1Q9Y5H4 931 aa21.77■■□□□ 1.08
SYNGR3-202ENST00000562045 UNC13CQ8NB66 2214 aa21.77■■□□□ 1.07
SYNGR3-202ENST00000562045 B4GAT1O43505 415 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 C1orf105O95561 183 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 RPN2P04844 631 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 AGTR2P50052 363 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 OR1D5P58170 312 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 CGB2Q6NT52 195 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 METTL2BQ6P1Q9 378 aaKnown RBP21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 PIWIL2Q8TC59 973 aaKnown RBP21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 MAGEC3Q8TD91 643 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 UBTD2Q8WUN7 234 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 NAT6Q93015 286 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 C12orf66Q96MD2 445 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 NRTNQ99748 197 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 TRIM55Q9BYV6 548 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 ILKAPQ9H0C8 392 aaPredicted RBP21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 APOBEC2Q9Y235 224 aaKnown RBP21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 ASF1AQ9Y294 204 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 RAP2CQ9Y3L5 183 aa21.76■■□□□ 1.07
SYNGR3-202ENST00000562045 A0A1W2PQM1 296 aa21.75■■□□□ 1.07
SYNGR3-202ENST00000562045 OR5K4A6NMS3 321 aa21.75■■□□□ 1.07
SYNGR3-202ENST00000562045 RHPN2P1A8MT19 583 aa21.75■■□□□ 1.07
SYNGR3-202ENST00000562045 SNX3O60493 162 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms